WormBase Tree Display for Gene: WBGene00019538

WBGene00019538 SMap: S_parent: Sequence: K08D12
  Identity: Version: 1
    Name: Sequence_name: K08D12.4
      Molecular_name: K08D12.4
        K08D12.4.1
        CE48876
      Other_name: CELE_K08D12.4 Accession_evidence: NDB BX284604
      Public_name: K08D12.4
    DB_info: Database: AceView gene 4C471
        WormQTL gene WBGene00019538
        WormFlux gene WBGene00019538
        NDB locus_tag CELE_K08D12.4
        NCBI gene 187157
        RefSeq protein NM_067723.3
        TrEMBL UniProtAcc Q966I9
        UniProt_GCRP UniProtAcc Q966I9
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (41)
    RNASeq_FPKM (74)
    Ortholog: WBGene00034333 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00080500 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00235154 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00225172 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g11052 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9917 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8361 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12694 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g572 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16176 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15275 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14397 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g12075 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g21574 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4324 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00048.g2532 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10591 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00166.g6101 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12121 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016169 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12415 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9921 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40030000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g9719 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242409 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00279180 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00266324 Strongyloides ratti From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in ADE sheath cell; anterior ganglion; arc ant V; and ciliated neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including multi-walled carbon nanotube; D-glucose; and Psoralens based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K08D12.4
    Corresponding_CDS_history: K08D12.4:wp239
    Corresponding_transcript: K08D12.4.1
    Other_sequence: PT04121
      PTC03582_1
      BMC03067_1
      JI462789.1
      JI172079.1
      Dviv_isotig15807
      JI483950.1
      MCC00848_1
      Dviv_isotig15806
      MC01861
  Experimental_info: RNAi_result (3)
    Expr_pattern: Expr1024156
      Expr1038443
      Expr1153960
      Expr2004905
      Expr2023128
    Microarray_results (14)
    Expression_cluster (130)
    Interaction: WBInteraction000553275
  Map_info: Positive: Positive_clone: K08D12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV -16.1983
  Reference: WBPaper00063946
  Method: Gene