WormBase Tree Display for Gene: WBGene00019058
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WBGene00019058 | SMap | S_parent | Sequence | F58F9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F58F9.4 | |||||||
Molecular_name | F58F9.4 | ||||||||
F58F9.4.1 | |||||||||
CE49259 | |||||||||
Other_name | CELE_F58F9.4 | Accession_evidence | NDB | BX284604 | |||||
Public_name | F58F9.4 | ||||||||
DB_info | Database | AceView | gene | 4G995 | |||||
WormQTL | gene | WBGene00019058 | |||||||
WormFlux | gene | WBGene00019058 | |||||||
NDB | locus_tag | CELE_F58F9.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019058|UniProtKB=Q20988 | |||||||
family | PTHR21516 | ||||||||
NCBI | gene | 186536 | |||||||
RefSeq | protein | NM_068538.3 | |||||||
TREEFAM | TREEFAM_ID | TF318575 | |||||||
TrEMBL | UniProtAcc | Q20988 | |||||||
UniProt_GCRP | UniProtAcc | Q20988 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (80) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00027939 | Caenorhabditis briggsae | From_analysis (2) | ||||||
WBGene00027941 | Caenorhabditis briggsae | From_analysis (2) | |||||||
WBGene00042938 | Caenorhabditis briggsae | From_analysis (2) | |||||||
WBGene00160889 | Caenorhabditis brenneri | From_analysis (2) | |||||||
CSP26.g14552 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP26.g14553 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP26.g14554 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP28.g21121 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP29.g8133 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP31.g11633 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP39.g15103 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP40.g10658 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
CSP40.g10659 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cnig_chr_IV.g13502 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Cnig_chr_IV.g13503 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Cnig_chr_IV.g13504 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold630.g17357 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00045.g2371 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00045.g2372 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00045.g2373 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00045.g2374 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00879.g16401 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
GCK72_013659 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
chrIV_pilon.g10571 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00066090 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
WBGene00074563 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Paralog (30) | |||||||||
Structured_description | Automated_description | Enriched in CEM; HOB; IL2 neuron; intestine; and ray neuron type B based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including 4-bromodiphenyl ether; Rifampin; and Sirolimus based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF272) and Protein of unknown function DUF272. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F58F9.4 | |||||||
Corresponding_CDS_history | F58F9.4:wp240 | ||||||||
Corresponding_transcript | F58F9.4.1 | ||||||||
Associated_feature | WBsf228389 | ||||||||
Experimental_info | RNAi_result | WBRNAi00049029 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016000 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033118 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (4) | |||||||||
Drives_construct | WBCnstr00026095 | ||||||||
Construct_product | WBCnstr00026095 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (109) | |||||||||
Interaction (31) | |||||||||
Map_info | Positive | Positive_clone | F58F9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 3.10606 | |||||||
Reference | WBPaper00033099 | ||||||||
Method | Gene |