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WormBase Tree Display for Gene: WBGene00018928

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Name Class

WBGene00018928SMapS_parentSequenceF56B3
IdentityVersion1
NameSequence_nameF56B3.2
Molecular_nameF56B3.2
F56B3.2.1
CE31545
Other_nameCELE_F56B3.2Accession_evidenceNDBBX284604
Public_nameF56B3.2
DB_infoDatabaseAceViewgene4B518
WormQTLgeneWBGene00018928
WormFluxgeneWBGene00018928
NDBlocus_tagCELE_F56B3.2
NCBIgene176902
RefSeqproteinNM_067582.8
TrEMBLUniProtAccQ9BKP1
UniProt_GCRPUniProtAccQ9BKP1
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (122)
RNASeq_FPKM (74)
OrthologWBGene00140824Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00160472Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00032010Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00068378Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00224716Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8555Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14912Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6463Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10771Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7484Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17061Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16333Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9174Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3902Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14036Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-F56B3.2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8871Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00261.g8182Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11654Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_20983Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_015095Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02969Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4435Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40073800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g9564Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00134661Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00248364Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00096791Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00266631Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00294907Trichuris murisFrom_analysisWormBase-Compara
WBGene00296404Trichuris murisFrom_analysisWormBase-Compara
WBGene00300171Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00019759Caenorhabditis elegansFrom_analysisTreeFam
Structured_descriptionAutomated_descriptionEnriched in several structures, including NSM; anterior hypodermis; germ line; interfacial epithelial cell; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eight chemicals including mianserin; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: EB module and EB domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF56B3.2
Corresponding_CDS_history (2)
Corresponding_transcriptF56B3.2.1
Other_sequence (14)
Associated_featureWBsf651630
WBsf667729
WBsf995270
WBsf1016613
WBsf229716
Experimental_infoRNAi_resultWBRNAi00048631Inferred_automaticallyRNAi_primary
WBRNAi00025697Inferred_automaticallyRNAi_primary
WBRNAi00008874Inferred_automaticallyRNAi_primary
WBRNAi00115251Inferred_automaticallyRNAi_primary
WBRNAi00115255Inferred_automaticallyRNAi_primary
WBRNAi00093027Inferred_automaticallyRNAi_primary
WBRNAi00023492Inferred_automaticallyRNAi_primary
Expr_patternExpr1027899
Expr1038167
Expr1152399
Expr2004272
Expr2022494
Drives_constructWBCnstr00026189
Construct_productWBCnstr00026189
Microarray_results (26)
Expression_cluster (115)
InteractionWBInteraction000217348
WBInteraction000521497
WBInteraction000523354
Map_infoPositivePositive_cloneF56B3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV-23.5191
MethodGene