WormBase Tree Display for Gene: WBGene00018866

WBGene00018866 SMap: S_parent: Sequence: F55A12
  Identity: Version: 3
    Name: CGC_name: nath-10 Person_evidence: WBPerson6405
            WBPerson172
      Sequence_name: F55A12.8
      Molecular_name: F55A12.8
        F55A12.8.1
        CE11131
      Other_name: let-599 Person_evidence: WBPerson533
        CELE_F55A12.8 Accession_evidence: NDB BX284601
      Public_name: nath-10
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History (2)
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nath
    Allele (32)
    Legacy_information: [McDowall JS] lethal
      [McDowall JS] Sterile adult
      [C.elegansII] h290 : sterile adult. NA1. [KR]
    Strain: WBStrain00001467
      WBStrain00001159
      WBStrain00001466
      WBStrain00023753
      WBStrain00032814
    RNASeq_FPKM (74)
    GO_annotation (22)
    Ortholog: WBGene00033289 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00060044 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00137213 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00175068 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00234194 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10335 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g11574 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g13867 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10187 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1762 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g2295 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g2296 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2344 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8245 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4804 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g4806 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13332 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9897 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24283 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00323.g9201 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-nath-10 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20500 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00314.g9252 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07115 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002571 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04499 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g14136 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10244900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g896 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237265 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00273987 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00260664 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00290545 Trichuris muris From_analysis: WormBase-Compara
      WBGene00290547 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000005076 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0027330 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1543 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:29830 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2138939 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1306717 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable rRNA cytidine N-acetyltransferase activity and tRNA binding activity. Predicted to be involved in rRNA acetylation involved in maturation of SSU-rRNA. Predicted to be located in nucleolus. Predicted to be part of small-subunit processome. Expressed in head; seam cell; and tail. Is an ortholog of human NAT10 (N-acetyltransferase 10). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F55A12.8
    Corresponding_transcript: F55A12.8.1
    Other_sequence (40)
    Associated_feature: WBsf219413
  Experimental_info: RNAi_result (23)
    Expr_pattern (11)
    Drives_construct: WBCnstr00002051
      WBCnstr00004201
      WBCnstr00026231
    Construct_product: WBCnstr00026231
    Regulate_expr_cluster: WBPaper00061466:nath-10(icb99)_downregulated
      WBPaper00061466:nath-10(icb99)_upregulated
      WBPaper00061466:nath-10(icb102)_downregulated
      WBPaper00061466:nath-10(icb102)_upregulated
    Microarray_results (18)
    Expression_cluster (95)
    Interaction (376)
  Map_info: Map: I Position: -0.07701 Error: 0.008125
    Positive: Positive_clone: F55A12 Inferred_automatically: From sequence, transcript, pseudogene data
    Negative: Negative_clone: C12H4
        C24H1
        C28A7
        C30A6
        F40D12
        M01A10
        M01E11
    Mapping_data: 2_point: 6034
        6033
      Pos_neg_data: 6035
        6036
        6037
    Pseudo_map_position
  Reference (17)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    [McDowall JS] Extrachromosomal arrays containing three cosmids generated, then manipulated genetically.
  Method: Gene