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WormBase Tree Display for Gene: WBGene00018839

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Name Class

WBGene00018839SMapS_parentSequenceF54H5
IdentityVersion1
NameSequence_nameF54H5.2
Molecular_nameF54H5.2a
F54H5.2a.1
CE01965
F54H5.2b
CE50342
F54H5.2c
CE50484
F54H5.2b.1
F54H5.2c.1
Other_nameF54H5.dCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_F54H5.2Accession_evidenceNDBBX284602
Public_nameF54H5.2
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (21)
RNASeq_FPKM (74)
GO_annotation00001291
00001292
00050613
00050614
00050615
00123840
00123841
00123842
OrthologWBGene00062397Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00032312Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WBGene00152180Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00128145Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00093651Pristionchus pacificusFrom_analysisOMA
WormBase-Compara
WBGene00107873Pristionchus pacificusFrom_analysisOMA
WormBase-Compara
WBGene00155550Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00139158Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00148716Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00192736Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00155854Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00192710Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00193757Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00191160Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00140140Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00148450Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00120905Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00122823Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00133946Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00138228Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00137385Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00216427Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00053920Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00055543Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00055647Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00078725Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00081210Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00061610Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00057686Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00054174Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00054130Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00059041Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00131492Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00037485Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00270475Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00225106Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7343Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16356Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1587Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g4390Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7728Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17487Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9683Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1549Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16102Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g16123Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g16174Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g20726Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g13635Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g20309Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7875Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1234Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g8478Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00468.g11204Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g5183Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_III.g10140Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00221.g7361Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00758.g15186Caenorhabditis sinicaFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04845Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10512Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g18338Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g9154Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20274910Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g4816Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244533Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00272850Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272931Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275232Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00256021Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00256163Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257741Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259273Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259730Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00260062Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00260939Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262090Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263929Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264200Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266730Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00294640Trichuris murisFrom_analysisWormBase-Compara
WBGene00295052Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0039908Drosophila melanogasterFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
ZFIN:ZDB-GENE-030131-8246Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
Panther
ZFIN:ZDB-GENE-120928-3Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
Panther
HGNC:19140Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
HGNC:19141Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
MGI:2147036Mus musculusFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
MGI:2155779Mus musculusFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
RGD:1311661Rattus norvegicusFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
RGD:1559518Rattus norvegicusFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
Paralog (93)
Structured_descriptionAutomated_descriptionPredicted to enable protein serine/threonine kinase activity. Predicted to be involved in signal transduction. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 11. Is an ortholog of human TTBK1 (tau tubulin kinase 1) and TTBK2 (tau tubulin kinase 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050961Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:19141)
Molecular_infoCorresponding_CDSF54H5.2a
F54H5.2b
F54H5.2c
Corresponding_transcriptF54H5.2a.1
F54H5.2b.1
F54H5.2c.1
Other_sequence (18)
Experimental_infoRNAi_resultWBRNAi00043267Inferred_automaticallyRNAi_primary
WBRNAi00012459Inferred_automaticallyRNAi_primary
WBRNAi00015673Inferred_automaticallyRNAi_primary
WBRNAi00032827Inferred_automaticallyRNAi_primary
WBRNAi00043268Inferred_automaticallyRNAi_primary
Expr_patternExpr1152191
Expr2004188
Expr2022408
Drives_constructWBCnstr00026251
Construct_productWBCnstr00026251
Microarray_results (12)
Expression_cluster (142)
InteractionWBInteraction000325067
WBInteraction000337935
WBInteraction000395069
WBInteraction000457859
Map_infoPositivePositive_cloneF54H5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-0.0552751
ReferenceWBPaper00027258
MethodGene