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WormBase Tree Display for Gene: WBGene00018702

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Name Class

WBGene00018702SMapS_parentSequenceF52E4
IdentityVersion1
NameSequence_nameF52E4.5
Molecular_nameF52E4.5
F52E4.5.1
CE46784
Other_nameCELE_F52E4.5Accession_evidenceNDBBX284606
Public_nameF52E4.5
DB_infoDatabase (8)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (29)
RNASeq_FPKM (74)
OrthologWBGene00034727Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00052050Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00142510Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00134999Caenorhabditis japonicaFrom_analysisOMA
Inparanoid_8
WormBase-Compara
CBOVI.g2737Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8097Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g9515Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g12378Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18970Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15621Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8620Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16718Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g15509Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19111Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19003Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00249.g7865Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-F52E4.5Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16541Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00046.g2415Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00898Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024025Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01631Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_X0276500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g18697Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00275278Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00289060Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in several structures, including arcade cell; head mesodermal cell; pharyngeal cell; rectal gland cell; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; proteomic; tiling array; and RNA-seq studies. Is affected by twelve chemicals including stavudine; Zidovudine; and allantoin based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domain: Galactose oxidase/kelch, beta-propeller.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF52E4.5
Corresponding_CDS_historyF52E4.5:wp228
Corresponding_transcriptF52E4.5.1
Other_sequenceCRC06019_1
CJC08893_1
CR04222
Associated_featureWBsf1004516
WBsf237133
WBsf237134
Experimental_infoRNAi_resultWBRNAi00047998Inferred_automaticallyRNAi_primary
WBRNAi00015423Inferred_automaticallyRNAi_primary
Expr_patternExpr1023306
Expr1151813
Expr2003999
Expr2022220
Drives_constructWBCnstr00026331
Construct_productWBCnstr00026331
Microarray_results (18)
Expression_cluster (244)
InteractionWBInteraction000444951
WBInteraction000552252
WBInteraction000568492
WBInteraction000571155
WBInteraction000578768
Map_infoPositivePositive_cloneF52E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-12.2924
ReferenceWBPaper00065331
MethodGene