WormBase Tree Display for Gene: WBGene00018615
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WBGene00018615 | SMap | S_parent | Sequence | F48G7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F48G7.4 | |||||||
Molecular_name (3) | |||||||||
Other_name | CELE_F48G7.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | F48G7.4 | ||||||||
DB_info | Database | AceView | gene | 5B97 | |||||
WormQTL | gene | WBGene00018615 | |||||||
WormFlux | gene | WBGene00018615 | |||||||
NDB | locus_tag | CELE_F48G7.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018615|UniProtKB=O44584 | |||||||
family | PTHR23015 | ||||||||
NCBI | gene | 185993 | |||||||
RefSeq | protein | NM_070865.4 | |||||||
TREEFAM | TREEFAM_ID | TF315839 | |||||||
TrEMBL | UniProtAcc | O44584 | |||||||
UniProt_GCRP | UniProtAcc | O44584 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (125) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00037421 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00057810 | Caenorhabditis remanei | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00164550 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00190794 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
CSP26.g12327 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP32.g6655 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
CSP40.g6421 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cni-F48G7.4 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold630.g21636 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_02709.g27634 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_12950 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_019534 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
chrV_pilon.g13057 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (221) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including accessory cell; coelomocyte; excretory cell; neurons; and ventral nerve cord based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; hsf-1; and eat-2 based on RNA-seq and microarray studies. Is affected by seven chemicals including Rifampin; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F48G7.4 | |||||||
Corresponding_CDS_history | F48G7.4:wp220 | ||||||||
Corresponding_transcript | F48G7.4.1 | ||||||||
Other_sequence | CGC01062_1 | ||||||||
Associated_feature | WBsf646643 | ||||||||
WBsf999184 | |||||||||
WBsf999185 | |||||||||
WBsf1019087 | |||||||||
WBsf1019088 | |||||||||
Experimental_info | RNAi_result | WBRNAi00047775 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032503 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015271 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028811 | ||||||||
Expr1038014 | |||||||||
Expr1151609 | |||||||||
Expr2003898 | |||||||||
Expr2022121 | |||||||||
Drives_construct | WBCnstr00026382 | ||||||||
Construct_product | WBCnstr00026382 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (107) | |||||||||
Interaction (127) | |||||||||
Map_info | Positive | Positive_clone | F48G7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | -19.9732 | |||||||
Reference | WBPaper00033099 | ||||||||
WBPaper00065331 | |||||||||
Method | Gene |