WormBase Tree Display for Gene: WBGene00018340

WBGene00018340 SMap: S_parent: Sequence: F42A10
  Identity: Version: 2
    Name: CGC_name: anmt-2 Person_evidence: WBPerson260
      Sequence_name: F42A10.3
      Molecular_name: F42A10.3
        F42A10.3.1
        CE29316
      Other_name: CELE_F42A10.3 Accession_evidence: NDB BX284603
      Public_name: anmt-2
    DB_info: Database: AceView gene 3H244
        WormQTL gene WBGene00018340
        WormFlux gene WBGene00018340
        NDB locus_tag CELE_F42A10.3
        Panther gene CAEEL|WormBase=WBGene00018340|UniProtKB=Q20308
          family PTHR10867
        NCBI gene 175868
        RefSeq protein NM_065933.10
        TREEFAM TREEFAM_ID TF313114
        TrEMBL UniProtAcc Q20308
        UniProt_GCRP UniProtAcc Q20308
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 04 Sep 2012 12:07:47 WBPerson2970 Name_change: CGC_name: anmt-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: anmt
    Allele (55)
    Strain: WBStrain00037687
    RNASeq_FPKM (74)
    GO_annotation: 00067773
      00067774
      00067775
      00123488
    Ortholog: WBGene00039979 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00055390 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00133270 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g4751 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13102 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19425 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g11349 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g16684 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3251 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15710 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g17327 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g11245 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00659.g13228 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00659.g13230 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-anmt-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18579 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00387.g10555 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08840 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010806 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03462 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g7375 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30148310 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7866 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00259480 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286289 Trichuris muris From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-040426-1329 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:7861 Homo sapiens From_analysis: Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:9160 Homo sapiens From_analysis: Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:6069 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1099443 Mus musculus From_analysis: Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:102963 Mus musculus From_analysis: Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1309606 Rattus norvegicus From_analysis: Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1597087 Rattus norvegicus From_analysis: Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Paralog: WBGene00011573 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015124 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable N-methyltransferase activity. Predicted to be located in cytosol. Expressed in pharyngeal muscle cell. Human ortholog(s) of this gene implicated in Alzheimer's disease; hypertension; multiple sclerosis; and renal cell carcinoma. Is an ortholog of human INMT (indolethylamine N-methyltransferase). Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:10652 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9160)
      DOID:7693 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:7861)
      DOID:4450 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:7861)
      DOID:2377 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9160)
      DOID:3393 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:7861)
      DOID:10763 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9160)
  Molecular_info: Corresponding_CDS: F42A10.3
    Corresponding_transcript: F42A10.3.1
    Other_sequence (34)
    Associated_feature: WBsf666970
      WBsf666971
      WBsf992660
      WBsf992661
      WBsf992662
      WBsf1015040
      WBsf1015041
      WBsf226771
  Experimental_info: RNAi_result: WBRNAi00032117 Inferred_automatically: RNAi_primary
      WBRNAi00005464 Inferred_automatically: RNAi_primary
      WBRNAi00014791 Inferred_automatically: RNAi_primary
      WBRNAi00047056 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr92
      Expr431
      Expr1012884
      Expr1037896
      Expr1150919
      Expr2009339
      Expr2027575
    Drives_construct: WBCnstr00026599
    Construct_product: WBCnstr00026599
    Microarray_results (18)
    Expression_cluster (172)
    Interaction (16)
  Map_info: Map: III Position: -1.41271
    Positive: Positive_clone: F42A10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene