WormBase Tree Display for Gene: WBGene00017874

WBGene00017874 SMap: S_parent: Sequence: F28A10
  Identity: Version: 2
    Name: CGC_name: acdh-9 Person_evidence: WBPerson7030
            WBPerson1657
      Sequence_name: F28A10.6
      Molecular_name: F28A10.6
        F28A10.6.1
        CE19411
      Other_name: CELE_F28A10.6 Accession_evidence: NDB BX284602
      Public_name: acdh-9
    DB_info: Database: AceView gene 2B138
        WormQTL gene WBGene00017874
        WormFlux gene WBGene00017874
        NDB locus_tag CELE_F28A10.6
        Panther gene CAEEL|WormBase=WBGene00017874|UniProtKB=Q95YB2
          family PTHR43831
        NCBI gene 173466
        RefSeq protein NM_061431.4
        TREEFAM TREEFAM_ID TF105052
        TrEMBL UniProtAcc Q95YB2
        UniProt_GCRP UniProtAcc Q95YB2
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 17 Apr 2008 14:02:17 WBPerson2970 Name_change: CGC_name: acdh-9
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: acdh
    Allele (37)
    RNASeq_FPKM (74)
    GO_annotation: 00089853
      00089854
      00123180
      00123181
    Ortholog: WBGene00060682 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029279 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00152263 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00149644 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      CBOVI.g6514 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2207 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g5207 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g20334 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15604 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20667 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g20944 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25585 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4824 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7561 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g29257 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23173 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00057.g2919 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-acdh-9 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9130 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00228.g7507 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_01672.g22436 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_07752.g38104 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09087 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_24086 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_007613 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02274 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g6602 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20020700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g3210 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00215577 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00114720 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259485 Strongyloides ratti From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-040426-828 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:87 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1914198 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1564209 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (22)
    Structured_description: Automated_description: Predicted to enable flavin adenine dinucleotide binding activity and oxidoreductase activity, acting on the CH-CH group of donors. Is an ortholog of human ACAD8 (acyl-CoA dehydrogenase family member 8). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F28A10.6
    Corresponding_transcript: F28A10.6.1
    Other_sequence (67)
    Associated_feature: WBsf649834
      WBsf986500
      WBsf1011446
      WBsf222634
  Experimental_info: RNAi_result (6)
    Expr_pattern: Expr1023307
      Expr1037683
      Expr1149678
      Expr2009140
      Expr2027377
    Drives_construct: WBCnstr00026948
    Construct_product: WBCnstr00026948
    Microarray_results (18)
    Expression_cluster (182)
    Interaction (51)
  Map_info: Map: II Position: -15.5909 Error: 5.3e-05
    Positive: Positive_clone: F28A10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026800
    WBPaper00029292
    WBPaper00038491
    WBPaper00042257
    WBPaper00055090
    WBPaper00062625
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene