WormBase Tree Display for Gene: WBGene00017775

WBGene00017775 SMap: S_parent: Sequence: F25B5
  Identity: Version: 1
    Name: Sequence_name: F25B5.3
      Molecular_name (15)
      Other_name: CELE_F25B5.3 Accession_evidence: NDB BX284603
      Public_name: F25B5.3
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (67)
    Strain: WBStrain00002336
      WBStrain00047567
      WBStrain00047568
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog: WBGene00030702 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00055535 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00139575 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00134487 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00100587 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00218882 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00226551 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5058 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12093 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15623 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13996 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3191 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24093 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12604 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1520 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g25024 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21787 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g21794 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-F25B5.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold553.g3682 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01197.g19174 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16492 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010672 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06115 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13299 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g10518 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30144100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7835 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237908 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00097275 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278509 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281511 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00261200 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00262359 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00263436 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291576 Trichuris muris From_analysis: WormBase-Compara
      WBGene00291578 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0034988 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030131-439 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:17820 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:1927186 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1359229 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00012423 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Concise_description: F25B5.3 is orthologous to the human gene NUCLEOTIDASE, 5-PRIME, CYTOSOLIC III (NT5C3; OMIM:606224), which when mutated leads to hemolytic anemia due to UMPH1 deficiency Curator_confirmed: WBPerson1823
            WBPerson567
          Date_last_updated: 09 Aug 2004 00:00:00
      Automated_description: Predicted to enable 5'-nucleotidase activity. Predicted to be involved in nucleotide metabolic process. Predicted to be located in cytoplasm. Is an ortholog of human NT5C3A (5'-nucleotidase, cytosolic IIIA). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F25B5.3a
      F25B5.3b
      F25B5.3c
      F25B5.3d
      F25B5.3e
    Corresponding_transcript: F25B5.3a.1
      F25B5.3b.1
      F25B5.3c.1
      F25B5.3d.1
      F25B5.3e.1
    Other_sequence (44)
    Associated_feature (13)
  Experimental_info: RNAi_result: WBRNAi00045475 Inferred_automatically: RNAi_primary
      WBRNAi00001375 Inferred_automatically: RNAi_primary
      WBRNAi00013853 Inferred_automatically: RNAi_primary
      WBRNAi00031355 Inferred_automatically: RNAi_primary
      WBRNAi00005627 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram420
      Expr1013296
      Expr1037638
      Expr1149394
      Expr2002947
      Expr2021163
    Drives_construct: WBCnstr00003005
      WBCnstr00027028
    Construct_product: WBCnstr00027028
    Microarray_results (49)
    Expression_cluster (157)
    Interaction (3)
  Map_info: Positive: Positive_clone: F25B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -1.43006
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene