WormBase Tree Display for Gene: WBGene00017759

WBGene00017759 SMap: S_parent: Sequence: F23H11
  Identity: Version: 2
    Name: CGC_name: sucl-2 Person_evidence (2)
      Sequence_name: F23H11.3
      Molecular_name: F23H11.3
        F23H11.3.1
        CE09611
      Other_name: CELE_F23H11.3 Accession_evidence: NDB BX284603
      Public_name: sucl-2
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 08 Dec 2011 12:14:43 WBPerson2970 Name_change: CGC_name: sucl-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sucl
    Allele (24)
    Strain: WBStrain00051258
    RNASeq_FPKM (74)
    GO_annotation (18)
    Contained_in_operon: CEOP3048
    Ortholog: WBGene00063473 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00035499 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00148270 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00136027 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00105376 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00234085 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g4468 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2213 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4781 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18653 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22497 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20895 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12069 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7730 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g2669 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11875 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g22006 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01003.g15322 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_III.g8450 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g16700 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01899.g23771 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14480 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010993 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08145 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g3945 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30334310 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00242260 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00256883 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286902 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296063 Trichuris muris From_analysis: WormBase-Compara
      WBGene00298060 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000005668 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0004888 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0038708 Drosophila melanogaster From_analysis: Hieranoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-040912-101 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:11449 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1927234 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:619821 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00007350 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable succinate-CoA ligase (ADP-forming) activity and succinate-CoA ligase (GDP-forming) activity. Predicted to be involved in tricarboxylic acid cycle. Predicted to be located in mitochondrion. Predicted to be part of succinate-CoA ligase complex (ADP-forming). Human ortholog(s) of this gene implicated in mitochondrial DNA depletion syndrome 9. Is an ortholog of human SUCLG1 (succinate-CoA ligase GDP/ADP-forming subunit alpha). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0080128 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11449)
  Molecular_info: Corresponding_CDS: F23H11.3
    Corresponding_transcript: F23H11.3.1
    Other_sequence (67)
    Associated_feature: WBsf226151
  Experimental_info: RNAi_result: WBRNAi00086467 Inferred_automatically: RNAi_primary
      WBRNAi00013830 Inferred_automatically: RNAi_primary
      WBRNAi00086466 Inferred_automatically: RNAi_primary
      WBRNAi00006571 Inferred_automatically: RNAi_primary
      WBRNAi00045441 Inferred_automatically: RNAi_primary
      WBRNAi00086465 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010200
      Expr1037626
      Expr1149361
      Expr2017104
      Expr2035240
    Drives_construct: WBCnstr00027043
    Construct_product: WBCnstr00027043
    Microarray_results (20)
    Expression_cluster (137)
    Interaction (86)
  Map_info: Map: III Position: -25.3593
    Positive: Positive_clone: F23H11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028381
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene