WormBase Tree Display for Gene: WBGene00017559

WBGene00017559 SMap: S_parent: Sequence: F18C5
  Identity: Version: 2
    Name: CGC_name: mpz-3 Person_evidence: WBPerson260
      Sequence_name: F18C5.4
      Molecular_name: F18C5.4
        F18C5.4.1
        CE31792
        F18C5.4.2
      Other_name: CELE_F18C5.4 Accession_evidence: NDB BX284602
      Public_name: mpz-3
    DB_info: Database: AceView gene 2G854
        WormQTL gene WBGene00017559
        WormFlux gene WBGene00017559
        NDB locus_tag CELE_F18C5.4
        Panther gene CAEEL|WormBase=WBGene00017559|UniProtKB=Q19547
          family PTHR31327
        NCBI gene 174083
        RefSeq protein NM_062924.6
        TREEFAM TREEFAM_ID TF321161
        TrEMBL UniProtAcc Q19547
        UniProt_GCRP UniProtAcc Q19547
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 07 Feb 2012 16:30:56 WBPerson2970 Name_change: CGC_name: mpz-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mpz
    Allele (33)
    Strain: WBStrain00051474
    RNASeq_FPKM (74)
    Ortholog: WBGene00025699 Caenorhabditis briggsae From_analysis: OrthoMCL
            WormBase-Compara
      WBGene00054109 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00155252 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00153223 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00235043 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g7276 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5614 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7598 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14295 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g9332 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18175 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1539 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21992 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g6302 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8519 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_11409.g23220 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12026 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00362.g10133 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04573 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006284 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g20768 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20276500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4796 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00283740 Pristionchus pacificus From_analysis: WormBase-Compara
    Paralog (14)
    Structured_description: Automated_description: Expressed in male gonad. Is predicted to encode a protein with the following domains: Uncharacterized protein T15H9.4-like and PDZ superfamily. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F18C5.4
    Corresponding_CDS_history: F18C5.4:wp84
    Corresponding_transcript: F18C5.4.1
      F18C5.4.2
    Other_sequence: CJC05235_1
    Associated_feature: WBsf665623
      WBsf988201
      WBsf988202
      WBsf1012398
      WBsf1012399
      WBsf223201
  Experimental_info: RNAi_result: WBRNAi00013500 Inferred_automatically: RNAi_primary
      WBRNAi00057146 Inferred_automatically: RNAi_primary
      WBRNAi00001062 Inferred_automatically: RNAi_primary
      WBRNAi00044936 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9251
      Expr1011757
      Expr1037539
      Expr1148904
      Expr2013680
      Expr2031914
    Drives_construct: WBCnstr00027206
    Construct_product: WBCnstr00027206
    Microarray_results (14)
    Expression_cluster (123)
    Interaction (34)
  Map_info: Map: II Position: -0.125575
    Positive: Positive_clone: F18C5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00035199
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene