WormBase Tree Display for Gene: WBGene00017483

WBGene00017483 SMap: S_parent: Sequence: F15E6
  Identity: Version: 2
    Name: CGC_name: lgc-22 Paper_evidence: WBPaper00029376
          Person_evidence: WBPerson1430
      Sequence_name: F15E6.2
      Molecular_name: F15E6.2a
        F15E6.2a.1
        CE36293
        F15E6.2b
        CE16991
        F15E6.2b.1
      Other_name: CELE_F15E6.2 Accession_evidence: NDB BX284604
      Public_name: lgc-22
    DB_info: Database: AceView gene 4F67
        WormQTL gene WBGene00017483
        WormFlux gene WBGene00017483
        NDB locus_tag CELE_F15E6.2
        NCBI gene 184533
        RefSeq protein NM_001268330.3
            NM_001268331.5
        TrEMBL UniProtAcc O44497
            I2HA93
        UniProt_GCRP UniProtAcc O44497
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 18 May 2007 16:58:23 WBPerson2970 Name_change: CGC_name: lgc-22
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    Allele (60)
    Strain: WBStrain00055270
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog: WBGene00024845 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00059501 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00159464 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00129774 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00074653 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      CBOVI.g11062 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7045 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4524 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5567 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7132 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g12347 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g586 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6989 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g29140 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g9687 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cang_2012_03_13_05770.g19825 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-lgc-22 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20133 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00227.g7497 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16333 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014670 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03251 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g3343 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40118200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g10173 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00266167 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286515 Trichuris muris From_analysis: WormBase-Compara
    Paralog (107)
    Structured_description: Automated_description: Predicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in excitatory postsynaptic potential and monoatomic ion transmembrane transport. Predicted to be located in neuron projection and synapse. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F15E6.2a
      F15E6.2b
    Corresponding_CDS_history: F15E6.2:wp114
    Corresponding_transcript: F15E6.2a.1
      F15E6.2b.1
    Other_sequence (16)
    Associated_feature: WBsf645914
      WBsf655017
      WBsf660092
      WBsf228183
  Experimental_info: RNAi_result (3)
    Expr_pattern: Expr1012985
      Expr1037520
      Expr1148708
      Expr1200311
      Expr2013101
      Expr2031333
    Drives_construct: WBCnstr00027263
    Construct_product: WBCnstr00027263
    Microarray_results (20)
    Expression_cluster (221)
    Interaction (184)
  Map_info: Map: IV Position: 0.143729
    Positive: Positive_clone: F15E6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene