WormBase Tree Display for Gene: WBGene00017420
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| WBGene00017420 | SMap | S_parent | Sequence | F13B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F13B9.2 | |||||||
| Molecular_name | F13B9.2 | ||||||||
| F13B9.2.1 | |||||||||
| CE04379 | |||||||||
| Other_name | CELE_F13B9.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F13B9.2 | ||||||||
| DB_info | Database | AceView | gene | XI905 | |||||
| WormQTL | gene | WBGene00017420 | |||||||
| WormFlux | gene | WBGene00017420 | |||||||
| NDB | locus_tag | CELE_F13B9.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017420|UniProtKB=Q19385 | |||||||
| family | PTHR37435 | ||||||||
| NCBI | gene | 181083 | |||||||
| RefSeq | protein | NM_076997.4 | |||||||
| TREEFAM | TREEFAM_ID | TF318220 | |||||||
| TrEMBL | UniProtAcc | Q19385 | |||||||
| UniProt_GCRP | UniProtAcc | Q19385 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00041225 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
| OrthoMCL | |||||||||
| WBGene00058808 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00145458 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00270754 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
| CBOVI.g3476 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP21.g14470 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
| CSP28.g20836 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g23076 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP31.g11996 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| CSP38.g9034 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| Cang_2012_03_13_00383.g10072 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
| Cni-F13B9.2 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold629.g10183 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| FL83_01983 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| OTIPU.nOt.2.0.1.g13081 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
| Sp34_X0160610 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g19549 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00001068 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00008511 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017307 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017998 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021326 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in hypodermis; rectal epithelial cell; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and let-60 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including methylmercury hydroxide; D-glucose; and sesamin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F13B9.2 | |||||||
| Corresponding_transcript | F13B9.2.1 | ||||||||
| Other_sequence | Hbac_isotig06200 | ||||||||
| Associated_feature | WBsf662374 | ||||||||
| WBsf1006103 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013196 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030874 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044486 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022842 | ||||||||
| Expr1037490 | |||||||||
| Expr1148435 | |||||||||
| Expr2002500 | |||||||||
| Expr2020718 | |||||||||
| Drives_construct | WBCnstr00027313 | ||||||||
| Construct_product | WBCnstr00027313 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (168) | |||||||||
| Interaction (91) | |||||||||
| Map_info (2) | |||||||||
| Method | Gene |
