WormBase Tree Display for Gene: WBGene00017317

WBGene00017317 SMap: S_parent: Sequence: F09G2
  Identity: Version: 2
    Name: CGC_name: attf-2 Person_evidence: WBPerson260
            WBPerson1997
      Sequence_name: F09G2.9
      Molecular_name: F09G2.9
        F09G2.9.1
        CE09304
      Other_name: CELE_F09G2.9 Accession_evidence: NDB BX284605
      Public_name: attf-2
    DB_info: Database: AceView gene 5H674
        WormQTL gene WBGene00017317
        WormFlux gene WBGene00017317
        NDB locus_tag CELE_F09G2.9
        NCBI gene 179106
        RefSeq protein NM_072424.8
        TREEFAM TREEFAM_ID TF316133
        TrEMBL UniProtAcc O17406
        UniProt_GCRP UniProtAcc O17406
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 22 Sep 2011 11:35:55 WBPerson2970 Name_change: CGC_name: attf-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: attf
    Allele (44)
    Possibly_affected_by: WBVar02154076
    Strain: WBStrain00048928
    RNASeq_FPKM (74)
    GO_annotation: 00122746
    Contained_in_operon: CEOP5140
    Ortholog: WBGene00071817 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00038372 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00106505 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00217473 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00192219 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00131484 Caenorhabditis japonica From_analysis: Inparanoid_8
      CBOVI.g845 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4660 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8793 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1933 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6607 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18746 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7179 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2355 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5940 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21480 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00026.g1554 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-attf-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15421 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01148.g18768 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09725 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017333 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00324 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_50227500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g14621 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F09G2.9
    Corresponding_transcript: F09G2.9.1
    Other_sequence (9)
    Associated_feature (13)
    Transcription_factor: WBTranscriptionFactor000982
  Experimental_info: RNAi_result: WBRNAi00093015 Inferred_automatically: RNAi_primary
      WBRNAi00001461 Inferred_automatically: RNAi_primary
      WBRNAi00007979 Inferred_automatically: RNAi_primary
      WBRNAi00076285 Inferred_automatically: RNAi_primary
      WBRNAi00030732 Inferred_automatically: RNAi_primary
      WBRNAi00044181 Inferred_automatically: RNAi_primary
      WBRNAi00013015 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10300
      Expr10301
      Expr1028162
      Expr1037446
      Expr1148141
      Expr2009515
      Expr2027752
    Drives_construct: WBCnstr00015237
      WBCnstr00015238
      WBCnstr00027393
      WBCnstr00042400
    Construct_product: WBCnstr00016489
      WBCnstr00027393
      WBCnstr00038800
      WBCnstr00042400
    Microarray_results (23)
    Expression_cluster (152)
    Interaction (69)
  Map_info: Map: V Position: 0.630379 Error: 0.00185
    Positive: Positive_clone: F09G2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025337
    WBPaper00028621
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene