WormBase Tree Display for Gene: WBGene00017091

WBGene00017091 SMap: S_parent: Sequence: E02C12
  Identity: Version: 2
    Name: CGC_name: ttr-40
      Sequence_name: E02C12.4
      Molecular_name (3)
      Other_name: CELE_E02C12.4 Accession_evidence: NDB BX284605
      Public_name: ttr-40
    DB_info: Database: AceView gene 5J834
        WormQTL gene WBGene00017091
        WormFlux gene WBGene00017091
        NDB locus_tag CELE_E02C12.4
        Panther gene CAEEL|WormBase=WBGene00017091|UniProtKB=Q65ZI5
          family PTHR21700
        NCBI gene 183986
        RefSeq protein NM_073023.6
        TREEFAM TREEFAM_ID TF315773
        TrEMBL UniProtAcc Q65ZI5
        UniProt_GCRP UniProtAcc Q65ZI5
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 Sep 2007 11:48:01 WBPerson2970 Name_change: CGC_name: ttr-40
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    Allele (19)
    RNASeq_FPKM (74)
    GO_annotation: 00081710
      00122570
    Contained_in_operon: CEOP5540
    Ortholog: WBGene00082313 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00099419 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00088603 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00133587 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00155824 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CSP21.g1493 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9540 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4548 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18100 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g13473 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7775 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g674 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g27827 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4037 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00153.g5743 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_12394.g23725 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-ttr-40 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15769 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00600.g13381 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_21187 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017066 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50245010 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15235 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00264305 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (62)
    Structured_description: Automated_description: Predicted to be located in cell surface and extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: E02C12.4
    Corresponding_CDS_history: E02C12.4:wp129
    Corresponding_transcript: E02C12.4.1
    Other_sequence (21)
    Associated_feature: WBsf234226
  Experimental_info: RNAi_result: WBRNAi00012636 Inferred_automatically: RNAi_primary
      WBRNAi00043589 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023736
      Expr1147581
      Expr2017607
      Expr2035745
    Drives_construct: WBCnstr00027575
    Construct_product: WBCnstr00027575
    Microarray_results (17)
    Expression_cluster (102)
    Interaction (69)
  Map_info: Map: V Position: 2.00991 Error: 0.000401
    Positive: Positive_clone: E02C12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene