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WormBase Tree Display for Gene: WBGene00016942

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Name Class

WBGene00016942SMapS_parentSequenceC55B7
IdentityVersion1
NameSequence_nameC55B7.3
Molecular_nameC55B7.3
C55B7.3.1
CE09014
Other_nameCELE_C55B7.3Accession_evidenceNDBBX284601
Public_nameC55B7.3
DB_infoDatabaseAceViewgene1H77
WormQTLgeneWBGene00016942
WormFluxgeneWBGene00016942
NDBlocus_tagCELE_C55B7.3
PanthergeneCAEEL|WormBase=WBGene00016942|UniProtKB=Q966M2
familyPTHR46163
NCBIgene172359
RefSeqproteinNM_001380558.2
TREEFAMTREEFAM_IDTF316265
TrEMBLUniProtAccQ966M2
UniProt_GCRPUniProtAccQ966M2
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (22)
RNASeq_FPKM (74)
GO_annotation00122444
00122445
Contained_in_operonCEOP1907
OrthologWBGene00068725Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00073847Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00037689Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00125392Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00230739Brugia malayiFrom_analysisWormBase-Compara
WBGene00231206Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g12200Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9386Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20660Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP29.g21204Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g21205Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g21206Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g21219Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11388Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g11417Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16822Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g17051Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g18134Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g19604Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g20175Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g20179Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2847Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g20540Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8474Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP40.g23478Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00068.g3296Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00711.g13607Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00711.g13609Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00711.g13610Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_14926.g24854Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_III.g9732Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7262Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00412.g11010Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01158.g18859Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18758Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013942Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01856Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02730Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10323Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g147Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40181200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1171Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242051Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242977Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00100215Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116053Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00257491Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291619Trichuris murisFrom_analysisWormBase-Compara
SGD:S000005734Saccharomyces cerevisiaeFrom_analysisHieranoid
Inparanoid
ZFIN:ZDB-GENE-050320-12Danio rerioFrom_analysisEnsEMBL-Compara
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-060503-458Danio rerioFrom_analysisEnsEMBL-Compara
OrthoInspector
SonicParanoid
HGNC:9659Homo sapiensFrom_analysisEnsEMBL-Compara
OMA
MGI:2156893Mus musculusFrom_analysisEnsEMBL-Compara
OMA
RGD:3448Rattus norvegicusFrom_analysisEnsEMBL-Compara
OMA
RGD:708516Rattus norvegicusFrom_analysisEnsEMBL-Compara
OMA
Paralog (64)
Structured_descriptionAutomated_descriptionPredicted to enable protein tyrosine phosphatase activity. Is an ortholog of human PTPN7 (protein tyrosine phosphatase non-receptor type 7).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC55B7.3
Corresponding_transcriptC55B7.3.1
Other_sequence (8)
Associated_featureWBsf983948
WBsf1009963
WBsf217841
Experimental_infoRNAi_resultWBRNAi00043227Inferred_automaticallyRNAi_primary
WBRNAi00030180Inferred_automaticallyRNAi_primary
WBRNAi00003241Inferred_automaticallyRNAi_primary
WBRNAi00044323Inferred_automaticallyRNAi_primary
WBRNAi00007382Inferred_automaticallyRNAi_primary
WBRNAi00003355Inferred_automaticallyRNAi_primary
Expr_patternExpr1015947
Expr1037268
Expr1147208
Expr2001960
Expr2020184
Drives_constructWBCnstr00027689
Construct_productWBCnstr00027689
Microarray_results (20)
Expression_cluster (189)
Interaction (32)
Map_infoPositivePositive_cloneC55B7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI1.16773
ReferenceWBPaper00010743
WBPaper00055090
WBPaper00062388
MethodGene