WormBase Tree Display for Gene: WBGene00016676

WBGene00016676 SMap: S_parent: Sequence: C45G9
  Identity: Version: 1
    Name: Sequence_name: C45G9.5
      Molecular_name: C45G9.5
        C45G9.5.1
        CE01856
      Other_name: CELE_C45G9.5 Accession_evidence: NDB BX284603
      Public_name: C45G9.5
    DB_info: Database: AceView gene 3G139
        WormQTL gene WBGene00016676
        WormFlux gene WBGene00016676
        NDB locus_tag CELE_C45G9.5
        NCBI gene 175686
        RefSeq protein NM_065671.9
        SwissProt UniProtAcc Q09278
        UniProt_GCRP UniProtAcc Q09278
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (20)
    Strain: WBStrain00002203
    RNASeq_FPKM (74)
    Ortholog: WBGene00155402 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00041454 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00121159 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00061868 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00104753 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00223043 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5996 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9568 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18670 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6666 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1453 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7257 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1264 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g20866 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4425 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11519 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00601.g12665 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C45G9.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14506 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_04534.g33164 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_09979.g39783 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06482 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008319 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04635 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g948 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30012000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7626 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242698 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00257759 Strongyloides ratti From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including SMB; coelomocyte; germ line; rectal epithelial cell; and sensory neurons based on tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray; proteomic; and RNA-seq studies. Is affected by six chemicals including D-glucose; paraquat; and Cry5B based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C45G9.5
    Corresponding_transcript: C45G9.5.1
    Other_sequence (15)
    Associated_feature: WBsf992281
      WBsf1014833
      WBsf224852
      WBsf224853
  Experimental_info: RNAi_result (19)
    Expr_pattern: Expr5512
      Expr1018094
      Expr1037166
      Expr1146537
      Expr2001663
      Expr2019890
    Drives_construct: WBCnstr00002946
      WBCnstr00027897
    Construct_product: WBCnstr00027897
    Microarray_results (19)
    Expression_cluster (113)
    Interaction (37)
  Map_info: Positive: Positive_clone: C45G9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -2.2063
  Method: Gene