WormBase Tree Display for Gene: WBGene00016493

WBGene00016493 SMap: S_parent: Sequence: C37A2
  Identity: Version: 1
    Name: Sequence_name: C37A2.7
      Molecular_name: C37A2.7
        C37A2.7.1
        CE30433
      Other_name: CELE_C37A2.7 Accession_evidence: NDB BX284601
      Public_name: C37A2.7
    DB_info: Database: AceView gene 1H366
        WormQTL gene WBGene00016493
        WormFlux gene WBGene00016493
        NDB locus_tag CELE_C37A2.7
        Panther gene CAEEL|WormBase=WBGene00016493|UniProtKB=O01504
          family PTHR21141
        NCBI gene 172401
        RefSeq protein NM_059543.8
        SwissProt UniProtAcc O01504
        TREEFAM TREEFAM_ID TF320650
        UniProt_GCRP UniProtAcc O01504
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (13)
    RNASeq_FPKM (74)
    GO_annotation (6)
    Contained_in_operon: CEOP1352
    Ortholog: WBGene00056198 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00033667 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            WormBase-Compara
      WBGene00153381 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00160890 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00138646 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00234329 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10640 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4214 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8821 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g16697 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g16708 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g16930 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g4198 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g6906 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3360 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5190 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g5929 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00292.g8626 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C37A2.7 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold539.g3343 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00145.g5557 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13437 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001878 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10578 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_10342300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1243 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237536 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00091695 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00263363 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00293832 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000002790 Saccharomyces cerevisiae From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      SGD:S000005399 Saccharomyces cerevisiae From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0003274 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-070327-2 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            Panther
            SonicParanoid
      HGNC:10377 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:1914436 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:3826366 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:621775 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1590791 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:2324107 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00004410 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004408 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004409 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017347 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translational elongation. Predicted to be located in cytosolic ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPLP2 (ribosomal protein lateral stalk subunit P2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C37A2.7
    Corresponding_transcript: C37A2.7.1
    Other_sequence (168)
    Associated_feature: WBsf663805
      WBsf219641
      WBsf219642
  Experimental_info: RNAi_result (14)
    Expr_pattern: Expr1025461
      Expr1037070
      Expr1146092
      Expr2001488
      Expr2019709
    Drives_construct: WBCnstr00028021
    Construct_product: WBCnstr00028021
    Microarray_results (19)
    Expression_cluster (150)
    Interaction (200)
  Map_info: Positive: Positive_clone: C37A2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 1.32088
  Reference: WBPaper00028381
    WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00063976
    WBPaper00064339
  Method: Gene