WormBase Tree Display for Gene: WBGene00016323

WBGene00016323 SMap: S_parent: Sequence: C32E8
  Identity: Version: 2
    Name (5)
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 11 Mar 2020 16:29:37 WBPerson1983 Name_change: CGC_name: pmlr-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pmlr
    Allele (15)
    RNASeq_FPKM (74)
    GO_annotation: 00050028
      00050029
      00050030
      00050031
    Ortholog: WBGene00062297 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00033017 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00161208 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00162550 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00136571 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00105841 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00222774 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g9383 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3158 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP28.g6892 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP31.g13340 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13439 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g341 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g16463 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00025.g1508 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C32E8.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00111.g4621 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_002179 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06027 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g1344 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10162900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g572 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237836 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00246722 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00258833 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00300375 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000004006 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoInspector
            Panther
            PhylomeDB
      FB:FBgn0039943 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-041026-3 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:30587 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2156003 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1359268 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00014011 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015233 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable mRNA binding activity. Predicted to be involved in miRNA processing. Predicted to be located in nucleus. Is an ortholog of human SNIP1 (Smad nuclear interacting protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C32E8.5
    Corresponding_transcript: C32E8.5.1
    Other_sequence (48)
    Associated_feature: WBsf643155
      WBsf217429
      WBsf217430
      WBsf217431
  Experimental_info: RNAi_result: WBRNAi00024701 Inferred_automatically: RNAi_primary
      WBRNAi00041691 Inferred_automatically: RNAi_primary
      WBRNAi00070959 Inferred_automatically: RNAi_primary
      WBRNAi00116792 Inferred_automatically: RNAi_primary
      WBRNAi00003059 Inferred_automatically: RNAi_primary
      WBRNAi00033326 Inferred_automatically: RNAi_primary
      WBRNAi00111895 Inferred_automatically: RNAi_primary
      WBRNAi00024700 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012917
      Expr1036985
      Expr1145712
      Expr2001317
      Expr2019540
    Drives_construct: WBCnstr00028159
    Construct_product: WBCnstr00028159
    Microarray_results (21)
    Expression_cluster (95)
    Interaction (35)
  Map_info: Map: I Position: -2.60146
    Positive: Positive_clone: C32E8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005423
    WBPaper00038491
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene