WormBase Tree Display for Gene: WBGene00015660

WBGene00015660 SMap: S_parent: Sequence: C09H5
  Identity: Version: 2
    Name: CGC_name: catp-3 Person_evidence: WBPerson61
      Sequence_name: C09H5.2
      Molecular_name: C09H5.2a
        C09H5.2a.1
        CE24797
        C09H5.2b
      Other_name: CELE_C09H5.2 Accession_evidence: NDB BX284605
      Public_name: catp-3
    DB_info: Database: AceView gene 5I559
        WormQTL gene WBGene00015660
        WormFlux gene WBGene00015660
        NDB locus_tag CELE_C09H5.2
        Panther gene CAEEL|WormBase=WBGene00015660|UniProtKB=O16331
          family PTHR43294
        NCBI gene 179189
        RefSeq protein NR_136356.1
            NM_072682.5
        TrEMBL UniProtAcc O16331
        UniProt_GCRP UniProtAcc O16331
        RNAcentral URSid URS0000A0F55B
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 21 Oct 2008 09:57:23 WBPerson2970 Name_change: CGC_name: catp-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: catp
    Allele (52)
    Strain: WBStrain00032113
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog: WBGene00052988 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032496 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00038829 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00161698 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135874 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00192788 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00119554 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00059520 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00194246 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00228653 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g12422 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g22068 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4362 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g9353 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g23087 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g6799 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g12011 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16281 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g5062 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g6532 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7565 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00363.g9783 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_01127.g15752 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_01917.g16817 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g16514 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold615.g6001 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00553.g12794 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03660 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018748 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14701 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g21801 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g2671 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g9617 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g9618 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50100600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g14898 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00246605 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00098715 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00266028 Strongyloides ratti From_analysis: WormBase-Compara
      HGNC:13816 Homo sapiens From_analysis: EnsEMBL-Compara
            Panther
      HGNC:819 Homo sapiens From_analysis: EnsEMBL-Compara
            Panther
      MGI:88113 Mus musculus From_analysis: EnsEMBL-Compara
            Panther
      MGI:1926943 Mus musculus From_analysis: EnsEMBL-Compara
            Panther
      RGD:2177 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Panther
      RGD:620569 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Panther
    Paralog (14)
    Structured_description: Automated_description: Predicted to enable P-type sodium:potassium-exchanging transporter activity. Acts upstream of or within IRE1-mediated unfolded protein response. Predicted to be located in plasma membrane. Is an ortholog of human ATP12A (ATPase H+/K+ transporting non-gastric alpha2 subunit) and ATP4A (ATPase H+/K+ transporting subunit alpha). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:10534 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:819)
  Molecular_info: Corresponding_CDS: C09H5.2a
    Corresponding_CDS_history: C09H5.2b:wp252
    Corresponding_transcript: C09H5.2b
      C09H5.2a.1
    Other_sequence (12)
    Associated_feature: WBsf646985
      WBsf232059
      WBsf232060
  Experimental_info: RNAi_result (5)
    Expr_pattern: Expr1025356
      Expr1036706
      Expr1144332
      Expr2009730
      Expr2027970
    Drives_construct: WBCnstr00028678
    Construct_product: WBCnstr00028678
    Microarray_results (26)
    Expression_cluster (361)
    Interaction (6)
  Map_info: Map: V Position: 1.00792 Error: 0.000219
    Positive: Positive_clone: C09H5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028789
    WBPaper00032454
    WBPaper00035429
    WBPaper00038491
    WBPaper00055090
    WBPaper00059550
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene