WormBase Tree Display for Gene: WBGene00015561

WBGene00015561 SMap: S_parent: Sequence: C07A12
  Identity: Version: 1
    Name: Sequence_name: C07A12.7
      Molecular_name (11)
      Other_name: CELE_C07A12.7 Accession_evidence: NDB BX284606
      Public_name: C07A12.7
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (77)
    RNASeq_FPKM (74)
    GO_annotation: 00021618
      00021619
      00021620
      00021621
      00021622
      00121432
      00121433
    Ortholog: WBGene00034959 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00051822 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00160664 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00129867 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00108391 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00222300 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g3095 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12005 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10929 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19111 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15481 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8930 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8436 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g12249 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g26666 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12454 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00221.g7309 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C07A12.7 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold622.g6259 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00006.g451 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00655 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024273 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00488 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g14603 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0254800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g18929 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241757 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00267692 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00289896 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000002766 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
      SGD:S000001150 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
      FB:FBgn0035995 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-060721-1 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-061013-3 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:11983 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      HGNC:11982 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:11984 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1338026 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1919193 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      MGI:2443306 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1562626 Rattus norvegicus From_analysis: OrthoFinder
            Panther
            PhylomeDB
      RGD:1306728 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1308024 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00000166 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004101 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004109 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008402 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable clathrin binding activity. Predicted to be involved in signal transduction. Predicted to be located in endosome and membrane. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Is an ortholog of human TOM1 (target of myb1 membrane trafficking protein) and TOM1L2 (target of myb1 like 2 membrane trafficking protein). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:612 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11982)
  Molecular_info (4)
  Experimental_info: RNAi_result: WBRNAi00039966 Inferred_automatically: RNAi_primary
      WBRNAi00028614 Inferred_automatically: RNAi_primary
      WBRNAi00010359 Inferred_automatically: RNAi_primary
      WBRNAi00039965 Inferred_automatically: RNAi_primary
      WBRNAi00095032 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025606
      Expr1036665
      Expr1144044
      Expr2000555
      Expr2018781
    Drives_construct: WBCnstr00028749
    Construct_product: WBCnstr00028749
    Microarray_results (33)
    Expression_cluster (154)
    Interaction (40)
  Map_info: Positive: Positive_clone: C07A12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -7.37088
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00061547
  Method: Gene