WormBase Tree Display for Gene: WBGene00015469

WBGene00015469 SMap: S_parent: Sequence: C05D2
  Identity: Version: 1
    Name: Sequence_name: C05D2.8
      Molecular_name: C05D2.8
        C05D2.8.1
        CE32116
      Other_name: CELE_C05D2.8 Accession_evidence: NDB BX284603
      Public_name: C05D2.8
    DB_info: Database: AceView gene 3G698
        WormQTL gene WBGene00015469
        WormFlux gene WBGene00015469
        NDB locus_tag CELE_C05D2.8
        Panther gene CAEEL|WormBase=WBGene00015469|UniProtKB=O45136
          family PTHR34717
        NCBI gene 175777
        RefSeq protein NM_065807.8
        TREEFAM TREEFAM_ID TF314572
        TrEMBL UniProtAcc O45136
        UniProt_GCRP UniProtAcc O45136
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (43)
    Strain: WBStrain00047578
    RNASeq_FPKM (74)
    Ortholog: WBGene00030649 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00055637 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00151172 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00091972 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CBOVI.g4695 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1964 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g20743 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9609 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15159 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14114 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15963 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7281 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20272 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g19694 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00850.g14550 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C05D2.8 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold626.g6372 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03344.g29879 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18520 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010580 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13914 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g10060 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30132000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7751 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00280939 Pristionchus pacificus From_analysis: WormBase-Compara
      FB:FBgn0040342 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Structured_description: Automated_description: Enriched in MSpppaaa; head mesodermal cell; intestine; mechanosensory neurons; and pharyngeal muscle cell based on SAGE; microarray; tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq; proteomic; and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (5)
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr1022064
      Expr1036613
      Expr1143846
      Expr2000472
      Expr2018695
    Drives_construct: WBCnstr00028822
    Construct_product: WBCnstr00016306
      WBCnstr00028822
    Microarray_results (22)
    Expression_cluster (186)
    Interaction (52)
  Map_info: Positive: Positive_clone: C05D2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -1.48348
  Reference: WBPaper00061547
  Method: Gene