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WormBase Tree Display for Gene: WBGene00015403

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Name Class

WBGene00015403SMapS_parentSequenceC03H5
IdentityVersion2
NameCGC_nameclec-10Person_evidenceWBPerson655
Sequence_nameC03H5.1
Molecular_nameC03H5.1
C03H5.1.1
CE32109
Other_nameCELE_C03H5.1Accession_evidenceNDBBX284602
Public_nameclec-10
DB_infoDatabaseAceViewgene2A693
WormQTLgeneWBGene00015403
WormFluxgeneWBGene00015403
NDBlocus_tagCELE_C03H5.1
PanthergeneCAEEL|WormBase=WBGene00015403|UniProtKB=O16660
familyPTHR22991
NCBIgene173430
RefSeqproteinNM_061324.9
TREEFAMTREEFAM_IDTF351663
TrEMBLUniProtAccO16660
UniProt_GCRPUniProtAccO16660
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
229 Apr 2005 13:53:45WBPerson2970Name_changeCGC_nameclec-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (25)
RNASeq_FPKM (74)
OrthologWBGene00147306Caenorhabditis brenneriFrom_analysisOMA
WBGene00155182Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00125130Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00094763Pristionchus pacificusFrom_analysisOMA
WBGene00143268Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157194Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00031720Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031721Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031722Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CSP26.g21326Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g21327Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g21328Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP40.g3897Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g3898Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00033.g1885Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g7580Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14964Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14965Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14966Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00823.g15809Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00823.g15810Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00823.g15811Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00823.g15812Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03317.g29791Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16895Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_16898Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_22170Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_24340Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_24685Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_007166Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007168Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007169Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007170Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007171Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007172Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007173Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrII_pilon.g3106Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00059630Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00059631Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00059632Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00059633Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00059634Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072593Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072594Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00083643Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00259062Strongyloides rattiFrom_analysisWormBase-Compara
RGD:2160Rattus norvegicusFrom_analysisInparanoid
SonicParanoid
RGD:2161Rattus norvegicusFrom_analysisInparanoid
SonicParanoid
RGD:621158Rattus norvegicusFrom_analysisInparanoid
SonicParanoid
Paralog (52)
Structured_descriptionAutomated_descriptionEnriched in intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by twenty-seven chemicals including Heme; tryptophan; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC03H5.1
Corresponding_CDS_historyC03H5.1:wp87
Corresponding_transcriptC03H5.1.1
Associated_featureWBsf717620
WBsf986401
WBsf986402
WBsf220754
WBsf220755
Experimental_infoRNAi_result (2)
Expr_patternExpr1017137
Expr1143660
Expr2010054
Expr2028295
Drives_constructWBCnstr00028870
Construct_productWBCnstr00028870
Microarray_results (16)
Expression_cluster (285)
Interaction (48)
Map_infoMapIIPosition-15.6118Error0.001187
PositivePositive_cloneC03H5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene