WormBase Tree Display for Gene: WBGene00013920

WBGene00013920 SMap: S_parent: Sequence: ZC506
  Identity: Version: 2
    Name: CGC_name: pssy-1 Person_evidence: WBPerson1105
      Sequence_name: ZC506.3
      Molecular_name: ZC506.3
        ZC506.3.1
        CE01681
        ZC506.3.2
      Other_name: CELE_ZC506.3 Accession_evidence: NDB BX284606
      Public_name: pssy-1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 02 Mar 2006 11:42:04 WBPerson2970 Name_change: CGC_name: pssy-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pssy
    Allele (53)
    RNASeq_FPKM (74)
    GO_annotation (15)
    Contained_in_operon: CEOPX107
    Ortholog: WBGene00025112 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00063153 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00136629 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00151848 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00158128 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00227663 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g3976 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12556 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g987 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17660 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20543 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25041 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12688 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6033 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5709 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g20036 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00370.g9895 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_X.g22949 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13644 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00198.g6830 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01418 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023500 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01344 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5076 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0062900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19826 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239134 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263818 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288468 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0287585 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-837 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-081031-18 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:9587 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1276575 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1308949 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00012095 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012897 Caenorhabditis elegans From_analysis: Panther
    Structured_description (2)
  Disease_info: Potential_model: DOID:0111507 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9587)
  Molecular_info: Corresponding_CDS: ZC506.3
    Corresponding_transcript: ZC506.3.1
      ZC506.3.2
    Other_sequence (26)
    Associated_feature: WBsf648437
      WBsf663213
      WBsf1006580
      WBsf236223
      WBsf236224
      WBsf236225
      WBsf236226
  Experimental_info: RNAi_result: WBRNAi00058984 Inferred_automatically: RNAi_primary
      WBRNAi00087512 Inferred_automatically: RNAi_primary
      WBRNAi00001747 Inferred_automatically: RNAi_primary
      WBRNAi00038086 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram2083
      Expr7173
      Expr1024311
      Expr1036228
      Expr1162417
      Expr2015137
      Expr2033375
    Drives_construct: WBCnstr00003699
      WBCnstr00029444
    Construct_product: WBCnstr00029444
    Microarray_results (22)
    Expression_cluster (107)
    Interaction: WBInteraction000286504
      WBInteraction000287546
      WBInteraction000308997
      WBInteraction000317134
      WBInteraction000378737
      WBInteraction000389768
  Map_info: Map: X Position: 1.73168
    Positive: Positive_clone: ZC506 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00040189
    WBPaper00042257
    WBPaper00055090
    WBPaper00060347
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene