WormBase Tree Display for Gene: WBGene00013608

WBGene00013608 SMap: S_parent: Sequence: Y102A5B
  Identity: Version: 2
    Name: CGC_name: clec-35 Person_evidence: WBPerson655
      Sequence_name: Y102A5B.2
      Molecular_name (6)
      Other_name: CELE_Y102A5B.2 Accession_evidence: NDB BX284605
      Public_name: clec-35
    DB_info: Database: AceView gene 5R332
        WormQTL gene WBGene00013608
        WormFlux gene WBGene00013608
        NDB locus_tag CELE_Y102A5B.2
        Panther gene CAEEL|WormBase=WBGene00013608|UniProtKB=H2KMJ0
          family PTHR22991
        NCBI gene 190827
        RefSeq protein NM_001269799.1
            NM_001269798.2
        TREEFAM TREEFAM_ID TF351663
        TrEMBL UniProtAcc Q9XXJ5
            H2KMJ0
        UniProt_GCRP UniProtAcc H2KMJ0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 29 Apr 2005 13:53:46 WBPerson2970 Name_change: CGC_name: clec-35
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (107)
    RNASeq_FPKM (74)
    GO_annotation: 00021350
    Ortholog: WBGene00056526 Caenorhabditis remanei From_analysis: OMA
            TreeFam
      WBGene00030198 Caenorhabditis briggsae From_analysis: OrthoMCL
            WormBase-Compara
      WBGene00080875 Caenorhabditis remanei From_analysis: OMA
            TreeFam
      WBGene00080930 Caenorhabditis remanei From_analysis: OMA
            TreeFam
      WBGene00063402 Caenorhabditis remanei From_analysis: OMA
      WBGene00147351 Caenorhabditis brenneri From_analysis: OMA
      WBGene00080836 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00139408 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00144314 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00146122 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00146799 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00303432 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP26.g18172 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g18180 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g18181 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP40.g12256 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g12259 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g12260 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_IV.g16167 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold621.g6198 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00843.g16012 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00843.g16014 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00968.g17174 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00968.g17175 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_20848 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_20852 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_20868 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_20869 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_20870 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_20871 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_20873 Caenorhabditis latens From_analysis: WormBase-Compara
      chrV_pilon.g17274 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00259062 Strongyloides ratti From_analysis: WormBase-Compara
      RGD:2160 Rattus norvegicus From_analysis: Inparanoid
            SonicParanoid
      RGD:2161 Rattus norvegicus From_analysis: Inparanoid
            SonicParanoid
      RGD:621158 Rattus norvegicus From_analysis: Inparanoid
            SonicParanoid
    Paralog (52)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y102A5B.2a
      Y102A5B.2b
    Corresponding_CDS_history: Y102A5B.2:wp109
    Corresponding_transcript: Y102A5B.2a.1
      Y102A5B.2b.1
  Experimental_info: RNAi_result: WBRNAi00036446 Inferred_automatically: RNAi_primary
      WBRNAi00019791 Inferred_automatically: RNAi_primary
      WBRNAi00055126 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015849
      Expr1158661
      Expr2010167
      Expr2028409
    Microarray_results (16)
    Expression_cluster (80)
    Interaction: WBInteraction000312457
  Map_info: Map: V Position: 11.2347 Error: 0.000438
    Positive: Positive_clone: Y102A5B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00062913
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene