WormBase Tree Display for Gene: WBGene00013435

WBGene00013435 SMap: S_parent: Sequence: Y66D12A
  Identity: Version: 2
    Name (5)
    DB_info: Database: AceView gene 3M661
        WormQTL gene WBGene00013435
        WormFlux gene WBGene00013435
        NDB locus_tag CELE_Y66D12A.9
        Panther gene CAEEL|WormBase=WBGene00013435|UniProtKB=Q95PZ7
          family PTHR10660
        NCBI gene 176588
        RefSeq protein NM_001420556.1
            NM_067092.8
        TrEMBL UniProtAcc A0A8S4SQL6
            Q95PZ7
        UniProt_GCRP UniProtAcc Q95PZ7
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 10 Nov 2021 16:42:28 WBPerson1983 Name_change: CGC_name: psme-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: psme
    Allele (162)
    RNASeq_FPKM (74)
    GO_annotation: 00088036
      00088037
      00088038
      00088039
      00088040
      00088041
      00120282
    Contained_in_operon: CEOP3723
    Ortholog: WBGene00063053 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00034046 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00136398 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00115097 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00191580 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00227242 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5221 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4410 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6318 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1104 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12809 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11001 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3357 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3751 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g544 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g20606 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00418.g10574 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_III.g9844 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold488.g2013 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00450.g11522 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_17612 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010241 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08042 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_30090800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g9051 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245016 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00289822 Trichuris muris From_analysis: WormBase-Compara
      WBGene00297978 Trichuris muris From_analysis: WormBase-Compara
      WBGene00298984 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0029133 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-991110-19 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:9570 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1096366 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1306996 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable endopeptidase activator activity. Predicted to be involved in regulation of G1/S transition of mitotic cell cycle and regulation of proteasomal protein catabolic process. Predicted to be located in cytoplasm and nucleoplasm. Predicted to be part of proteasome activator complex. Is an ortholog of human PSME3 (proteasome activator subunit 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y66D12A.9a
      Y66D12A.9b
    Corresponding_transcript: Y66D12A.9a.1
      Y66D12A.9b.1
    Other_sequence (42)
    Associated_feature (5)
  Experimental_info: RNAi_result: WBRNAi00057955 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017382
      Expr1036002
      Expr1161383
      Expr2008189
      Expr2026429
    Microarray_results (17)
    Expression_cluster (146)
    Interaction (52)
  Map_info: Map: III Position: 10.9733
    Positive: Positive_clone: Y66D12A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027363
    WBPaper00038491
    WBPaper00055090
    WBPaper00061547
    WBPaper00065312
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene