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WormBase Tree Display for Gene: WBGene00012952

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Name Class

WBGene00012952SMapS_parentSequenceY47H9C
IdentityVersion1
NameSequence_nameY47H9C.9
Molecular_nameY47H9C.9
Y47H9C.9.1
CE43153
Other_nameCELE_Y47H9C.9Accession_evidenceNDBBX284601
Public_nameY47H9C.9
DB_infoDatabaseAceViewgene1M492
WormQTLgeneWBGene00012952
WormFluxgeneWBGene00012952
NDBlocus_tagCELE_Y47H9C.9
PanthergeneCAEEL|WormBase=WBGene00012952|UniProtKB=Q9XWD9
familyPTHR31424
NCBIgene190000
RefSeqproteinNM_060617.2
TREEFAMTREEFAM_IDTF322826
TrEMBLUniProtAccQ9XWD9
UniProt_GCRPUniProtAccQ9XWD9
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (51)
RNASeq_FPKM (74)
OrthologWBGene00025872Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00216251Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00212868Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00149938Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00142535Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00179497Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00120899Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00218800Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00074975Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00152830Caenorhabditis brenneriFrom_analysisWormBase-Compara
CSP26.g16344Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g9021Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP39.g6864Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9120Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Csp5_scaffold_06580.g36737Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10931Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002877Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIII_pilon.g7255Caenorhabditis elegansFrom_analysisWormBase-Compara
chrI_pilon.g2359Caenorhabditis elegansFrom_analysisWormBase-Compara
chrI_pilon.g2360Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00123130Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00210282Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213051Caenorhabditis japonicaFrom_analysisWormBase-Compara
nigoni.pc_2016.07.11_007.g26819Caenorhabditis nigoniFrom_analysisWormBase-Compara
WBGene00085540Caenorhabditis remaneiFrom_analysisWormBase-Compara
Paralog (15)
Structured_descriptionAutomated_descriptionIs affected by several genes including daf-16; daf-12; and eat-2 based on tiling array and RNA-seq studies. Is affected by eight chemicals including stavudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF1280 and Protein of unknown function (DUF1280).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY47H9C.9
Corresponding_CDS_historyY47H9C.9:wp196
Corresponding_transcriptY47H9C.9.1
Associated_featureWBsf985411
Experimental_infoRNAi_result (11)
Expr_patternExpr1160305
Expr2025885
Microarray_results (28)
Expression_cluster (64)
InteractionWBInteraction000224554
WBInteraction000359387
Map_infoPositivePositive_cloneY47H9CInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI12.9091
MethodGene