WormBase Tree Display for Gene: WBGene00012830

WBGene00012830 SMap: S_parent: Sequence: Y43F8C
  Identity: Version: 2
    Name: CGC_name: mrps-28 Person_evidence: WBPerson261
            WBPerson555
      Sequence_name: Y43F8C.8
      Molecular_name: Y43F8C.8
        Y43F8C.8.1
        CE21906
      Other_name: CELE_Y43F8C.8 Accession_evidence: NDB BX284605
      Public_name: mrps-28
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 10 Jun 2011 16:50:11 WBPerson2970 Name_change: CGC_name: mrps-28
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mrps
    Allele (38)
    RNASeq_FPKM (74)
    GO_annotation: 00103711
      00103712
    Ortholog: WBGene00028096 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065956 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00150005 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125310 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00226810 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g661 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1873 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g13332 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5717 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g19172 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14292 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9548 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g20695 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9695 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1955 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-mrps-28 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21905 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00469.g11787 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14270 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_021755 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01170 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_50408500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g17933 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00240007 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00258639 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292867 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0034361 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-061110-52 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:14513 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1913480 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1597461 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to be located in ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 47. Is an ortholog of human MRPS28 (mitochondrial ribosomal protein S28). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0112114 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14513)
  Molecular_info (4)
  Experimental_info: RNAi_result (13)
    Expr_pattern: Expr1015088
      Expr1035678
      Expr1160010
      Expr2013749
      Expr2031984
    Microarray_results (27)
    Expression_cluster (110)
    Interaction (51)
  Map_info: Map: V Position: 22.621 Error: 0.023685
    Positive: Positive_clone: Y43F8C Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene