WormBase Tree Display for Gene: WBGene00012681

WBGene00012681 SMap: S_parent: Sequence: Y39B6A
  Identity: Version: 2
    Name: CGC_name: asp-15 Person_evidence: WBPerson261
      Sequence_name: Y39B6A.22
      Molecular_name: Y39B6A.22
        Y39B6A.22.1
        CE29863
      Other_name: Y39B6B.i Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y39B6A.22 Accession_evidence: NDB BX284605
      Public_name: asp-15
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 23 Nov 2012 14:10:21 WBPerson2970 Name_change: CGC_name: asp-15
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: asp
    Allele (29)
    RNASeq_FPKM (74)
    GO_annotation: 00084798
      00084799
      00084800
      00119710
      00119711
    Ortholog: WBGene00039341 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00223753 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2066 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15581 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP31.g26135 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g7941 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      Cang_2012_03_13_28350.g27640 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g21706 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00997.g17417 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_04950.g34101 Caenorhabditis sinica From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09909 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g11252 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g316 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50381810 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g17810 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00244151 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00244157 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00105997 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106393 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111789 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115380 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115381 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278598 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278974 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279465 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279739 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258196 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288389 Trichuris muris From_analysis: WormBase-Compara
      WBGene00288391 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000004110 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            OrthoFinder
            SonicParanoid
      SGD:S000004111 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            OrthoFinder
            SonicParanoid
      SGD:S000002551 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            OrthoFinder
            SonicParanoid
      SGD:S000001277 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            OrthoFinder
            SonicParanoid
      SGD:S000001478 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            OrthoFinder
            SonicParanoid
      SGD:S000006075 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Panther
            SonicParanoid
      FB:FBgn0051661 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Panther
      FB:FBgn0038506 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-010620-1 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-040630-3 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      HGNC:9958 Homo sapiens From_analysis: EnsEMBL-Compara
            Panther
      MGI:109365 Mus musculus From_analysis: EnsEMBL-Compara
            Panther
      MGI:97898 Mus musculus From_analysis: EnsEMBL-Compara
            Panther
      MGI:97899 Mus musculus From_analysis: EnsEMBL-Compara
            Panther
      RGD:3554 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Panther
      RGD:61940 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Panther
    Paralog (17)
    Structured_description: Automated_description: Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); chronic fatigue syndrome; and congenital adrenal hyperplasia. Is an ortholog of human REN (renin). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model (17)
  Molecular_info: Corresponding_CDS: Y39B6A.22
    Corresponding_transcript: Y39B6A.22.1
  Experimental_info: RNAi_result: WBRNAi00056175 Inferred_automatically: RNAi_primary
      WBRNAi00076779 Inferred_automatically: RNAi_primary
      WBRNAi00020383 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014117
      Expr1159680
    Drives_construct: WBCnstr00029865
    Construct_product: WBCnstr00029865
    Microarray_results (14)
    Expression_cluster (23)
  Map_info: Map: V Position: 18.4993
    Positive: Positive_clone: Y39B6A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene