WormBase Tree Display for Gene: WBGene00012339

WBGene00012339 SMap: S_parent: Sequence: W07G4
  Identity: Version: 1
    Name: Sequence_name: W07G4.5
      Molecular_name (3)
      Other_name: CELE_W07G4.5 Accession_evidence: NDB BX284605
      Public_name: W07G4.5
    DB_info: Database: AceView gene 5N529
        WormQTL gene WBGene00012339
        WormFlux gene WBGene00012339
        NDB locus_tag CELE_W07G4.5
        NCBI gene 179791
        RefSeq protein NM_073860.6
        TREEFAM TREEFAM_ID TF319823
        TrEMBL UniProtAcc Q1HB02
        UniProt_GCRP UniProtAcc Q1HB02
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (21)
    RNASeq_FPKM (74)
    Ortholog: WBGene00031027 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00058998 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00157833 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135891 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g1111 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g20123 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3092 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g19121 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g8248 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g13774 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g5145 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g9508 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-W07G4.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold461.g1477 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00416.g11056 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07661 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017680 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50274510 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16167 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in head mesodermal cell; intestine; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W07G4.5
    Corresponding_CDS_history: W07G4.5a:wp229
      W07G4.5b:wp229
    Corresponding_transcript: W07G4.5.1
    Other_sequence: CRC07011_1
      CJC07603_1
      CBC11985_1
      CR08513
    Associated_feature: WBsf647434
      WBsf647435
      WBsf1001702
      WBsf232736
  Experimental_info: RNAi_result: WBRNAi00019708 Inferred_automatically: RNAi_primary
      WBRNAi00036368 Inferred_automatically: RNAi_primary
      WBRNAi00054965 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10813
      Expr1012854
      Expr1035459
      Expr1158498
      Expr2006848
      Expr2025073
    Drives_construct: WBCnstr00029990
    Construct_product: WBCnstr00017144
      WBCnstr00029990
    Microarray_results (18)
    Expression_cluster (200)
    Interaction (58)
  Map_info: Positive: Positive_clone: W07G4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 4.84469
  Reference: WBPaper00042170
  Method: Gene