WormBase Tree Display for Gene: WBGene00012140

WBGene00012140 SMap: S_parent: Sequence: T28F4
  Identity: Version: 1
    Name: Sequence_name: T28F4.5
      Molecular_name: T28F4.5
        T28F4.5.1
        CE06527
        T28F4.5.2
      Other_name: CELE_T28F4.5 Accession_evidence: NDB BX284601
      Public_name: T28F4.5
    DB_info: Database: AceView gene 1I69
        WormQTL gene WBGene00012140
        WormFlux gene WBGene00012140
        NDB locus_tag CELE_T28F4.5
        Panther gene CAEEL|WormBase=WBGene00012140|UniProtKB=Q22850
          family PTHR13177
        NCBI gene 172503
        RefSeq protein NM_059701.8
        TREEFAM TREEFAM_ID TF318830
        TrEMBL UniProtAcc Q22850
        UniProt_GCRP UniProtAcc Q22850
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (21)
    RNASeq_FPKM (74)
    GO_annotation: 00076609
      00076610
      00076611
      00076612
    Ortholog: WBGene00032911 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00070299 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00124605 Caenorhabditis japonica From_analysis: OMA
      WBGene00141103 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00147239 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00100192 Pristionchus pacificus From_analysis: Inparanoid_8
      CSP26.g10383 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8630 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10838 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP38.g5640 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9623 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g15803 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_I.g104 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g16881 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01431.g20884 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12342 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000066 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_10094100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1395 Caenorhabditis elegans From_analysis: WormBase-Compara
      FB:FBgn0033624 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      ZFIN:ZDB-GENE-000511-3 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
            PhylomeDB
      HGNC:2672 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
            PhylomeDB
      MGI:1918190 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      RGD:620641 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
            PhylomeDB
    Paralog: WBGene00010019 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Concise_description: The T28F4.5 gene encodes a homolog of Death Associated Protein 1 (DAP-1) protein that may be involved in apoptosis. Paper_evidence: WBPaper00004589
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable death domain binding activity. Predicted to be involved in apoptotic signaling pathway; cellular response to amino acid starvation; and negative regulation of autophagy. Is an ortholog of human DAP (death associated protein). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (4)
  Experimental_info: RNAi_result: WBRNAi00054444 Inferred_automatically: RNAi_primary
      WBRNAi00036105 Inferred_automatically: RNAi_primary
      WBRNAi00004348 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025397
      Expr1035369
      Expr1157988
      Expr2006634
      Expr2024851
    Drives_construct: WBCnstr00030111
    Construct_product: WBCnstr00030111
    Microarray_results (25)
    Expression_cluster (300)
    Interaction (143)
  Map_info: Positive: Positive_clone: T28F4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 2.09689
  Reference: WBPaper00033099
  Method: Gene