WormBase Tree Display for Gene: WBGene00012101

WBGene00012101 SMap: S_parent: Sequence: T27F2
  Identity: Version: 2
    Name: CGC_name: zip-10 Person_evidence: WBPerson260
            WBPerson460
      Sequence_name: T27F2.4
      Molecular_name: T27F2.4
        T27F2.4.1
        CE06522
      Other_name: CELE_T27F2.4 Accession_evidence: NDB BX284605
      Public_name: zip-10
    DB_info: Database: AceView gene 5M130
        WormQTL gene WBGene00012101
        WormFlux gene WBGene00012101
        NDB locus_tag CELE_T27F2.4
        NCBI gene 179599
        RefSeq protein NM_073550.8
        SwissProt UniProtAcc Q22835
        TREEFAM TREEFAM_ID TF320566
        UniProt_GCRP UniProtAcc Q22835
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 23 Sep 2011 16:44:07 WBPerson2970 Name_change: CGC_name: zip-10
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: zip
    Allele (20)
    Strain: WBStrain00033174
      WBStrain00048369
      WBStrain00048370
    RNASeq_FPKM (74)
    GO_annotation: 00076590
      00076591
      00076592
      00076593
      00076594
      00076595
      00076596
    Ortholog: WBGene00052329 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00041674 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00142291 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00120505 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00102568 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      CSP26.g10794 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g826 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g751 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22508 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14239 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2017 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3065 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g14410 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00595.g12602 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-zip-10 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g16593 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00353.g9954 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10643 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018080 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50151700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15832 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enables core promoter sequence-specific DNA binding activity. Involved in regulation of gene expression. Located in nucleus. Expressed in neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T27F2.4
    Corresponding_transcript: T27F2.4.1
    Other_sequence (24)
    Associated_feature: WBsf653135
      WBsf978526
      WBsf1001401
      WBsf1001402
      WBsf1020481
      WBsf234563
      WBsf234564
    Transcription_factor: WBTranscriptionFactor000569
  Experimental_info: RNAi_result (6)
    Expr_pattern: Expr4598
      Expr7690
      Expr13758
      Expr1022546
      Expr1157883
      Expr2018152
      Expr2036289
    Drives_construct (3)
    Construct_product: WBCnstr00022548
      WBCnstr00030134
    Microarray_results (18)
    Expression_cluster (331)
    Interaction (27)
  Map_info: Map: V Position: 3.23431 Error: 0.000952
    Positive: Positive_clone: T27F2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene