WormBase Tree Display for Gene: WBGene00011975

WBGene00011975 SMap: S_parent: Sequence: CHROMOSOME_I
  Identity: Version: 2
    Name: CGC_name: golg-5 Person_evidence: WBPerson260
      Sequence_name: T24B1.1
      Molecular_name: T24B1.1
        T24B1.1.1
        CE27210
      Other_name: CELE_T24B1.1 Accession_evidence: NDB BX284601
      Public_name: golg-5
    DB_info: Database: AceView gene 1I253
        WormQTL gene WBGene00011975
        WormFlux gene WBGene00011975
        NDB locus_tag CELE_T24B1.1
        Panther gene CAEEL|WormBase=WBGene00011975|UniProtKB=P90970
          family PTHR13815
        NCBI gene 172527
        RefSeq protein NM_059736.6
        SwissProt UniProtAcc P90970
        TREEFAM TREEFAM_ID TF319468
        UniProt_GCRP UniProtAcc P90970
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 04 Jan 2022 00:59:31 WBPerson1983 Name_change: CGC_name: golg-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: golg
    Allele (36)
    Strain: WBStrain00037006
      WBStrain00055154
    RNASeq_FPKM (74)
    GO_annotation (13)
    Contained_in_operon: CEOP1416
    Ortholog: WBGene00023719 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065436 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00150169 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00104483 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00192343 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00123792 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00226237 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10069 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2637 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g12265 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8652 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10860 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g8228 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2929 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22022 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24442 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00209.g7047 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g204 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_I.g206 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g16889 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02811.g27996 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13136 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000031 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13099 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_10107200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1434 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00214735 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00289619 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0039188 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-040426-2749 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
      HGNC:4428 Homo sapiens From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:1351475 Mus musculus From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
      RGD:1308163 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
    Structured_description: Concise_description: T24B1.1 is orthologous to the human gene GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A, 5 (GOLGA5; OMIM:606918), which when mutated leads to disease. Curator_confirmed: WBPerson1823
            WBPerson567
          Date_last_updated: 06 Aug 2004 00:00:00
      Automated_description: Predicted to enable protein homodimerization activity. Predicted to be involved in Golgi organization and retrograde transport, vesicle recycling within Golgi. Predicted to be located in Golgi cisterna and Golgi membrane. Is an ortholog of human GOLGA5 (golgin A5). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T24B1.1
    Corresponding_transcript: T24B1.1.1
    Other_sequence (25)
    Associated_feature: WBsf643476
      WBsf984247
      WBsf1010124
      WBsf218056
      WBsf218057
      WBsf218058
  Experimental_info: RNAi_result: WBRNAi00116984 Inferred_automatically: RNAi_primary
      WBRNAi00019098 Inferred_automatically: RNAi_primary
      WBRNAi00054016 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023695
      Expr1035291
      Expr1157560
      Expr2006434
      Expr2024654
    Drives_construct: WBCnstr00030234
    Construct_product: WBCnstr00030234
    Microarray_results (19)
    Expression_cluster (82)
    Interaction (3)
  Map_info: Map: I Position: 2.23174
    Positive: Positive_clone: T24B1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00046586
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene