WormBase Tree Display for Gene: WBGene00011353

WBGene00011353 SMap: S_parent: Sequence: T01H8
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: serr
    Allele (30)
    Strain: WBStrain00032097
    RNASeq_FPKM (74)
    GO_annotation (10)
    Contained_in_operon: CEOP1937
    Ortholog: WBGene00069444 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00072952 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00033458 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00034453 Caenorhabditis briggsae From_analysis: OrthoMCL
            WormBase-Compara
      WBGene00064238 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00153513 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00143884 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00097342 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00162480 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00102126 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00225751 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g12079 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g12408 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1689 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2260 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g7707 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g7708 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13135 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4448 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24343 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00682.g13401 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g2323 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_IV.g12244 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold479.g1814 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20444 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01259.g19642 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07049 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_07201 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_012687 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_012690 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06887 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16592 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10315000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1615 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00164984 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00237057 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00261718 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00290656 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000001701 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-110914-192 Danio rerio From_analysis: Hieranoid
            OrthoInspector
      ZFIN:ZDB-GENE-110914-210 Danio rerio From_analysis: Hieranoid
            OrthoInspector
      HGNC:14398 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1351636 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:735094 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (12)
    Structured_description: Automated_description: Predicted to enable L-serine ammonia-lyase activity; amino-acid racemase activity; and ion binding activity. Predicted to be involved in D-serine biosynthetic process. Is an ortholog of human SRR (serine racemase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T01H8.2
    Corresponding_transcript: T01H8.2.1
    Other_sequence (15)
    Associated_feature: WBsf984462
      WBsf1010253
      WBsf219943
      WBsf219944
  Experimental_info: RNAi_result: WBRNAi00052179 Inferred_automatically: RNAi_primary
      WBRNAi00004100 Inferred_automatically: RNAi_primary
      WBRNAi00094892 Inferred_automatically: RNAi_primary
      WBRNAi00116569 Inferred_automatically: RNAi_primary
      WBRNAi00035041 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016426
      Expr1034999
      Expr1155810
      Expr2005727
      Expr2023941
    Drives_construct: WBCnstr00030721
    Construct_product: WBCnstr00030721
    Microarray_results (20)
    Expression_cluster (139)
    Interaction (19)
  Map_info: Map: I Position: 2.96031
    Positive: Positive_clone: T01H8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00041771
    WBPaper00049900
    WBPaper00055090
    WBPaper00060161
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene