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WormBase Tree Display for Gene: WBGene00011145

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Name Class

WBGene00011145SMapS_parentSequenceR08D7
IdentityVersion1
NameSequence_nameR08D7.5
Molecular_nameR08D7.5
R08D7.5.1
CE51740
Other_nameCELE_R08D7.5Accession_evidenceNDBBX284603
Public_nameR08D7.5
DB_infoDatabaseAceViewgene3K65
WormQTLgeneWBGene00011145
WormFluxgeneWBGene00011145
NDBlocus_tagCELE_R08D7.5
PanthergeneCAEEL|WormBase=WBGene00011145|UniProtKB=P30644
familyPTHR23050
NCBIgene187699
RefSeqproteinNM_066585.4
SwissProtUniProtAccP30644
TREEFAMTREEFAM_IDTF101141
UniProt_GCRPUniProtAccP30644
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (18)
RNASeq_FPKM (74)
GO_annotation00040867
00040868
00040869
00040870
00040871
00118427
Contained_in_operonCEOP3560
OrthologWBGene00029050Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00055222Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00146700Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g4793Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10730Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g21873Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20168Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3382Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25910Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1808Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7655Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6159Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g6764Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00372.g9929Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12626Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00464.g11714Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_22280Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009291Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04361Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_30255700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8518Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00138354Caenorhabditis japonicaFrom_analysisWormBase-Compara
nigoni.pc_2016.07.11_010.g27450Caenorhabditis nigoniFrom_analysisWormBase-Compara
WBGene00114955Pristionchus pacificusFrom_analysisWormBase-Compara
FB:FBgn0040010Drosophila melanogasterFrom_analysisOMA
Panther
PhylomeDB
ZFIN:ZDB-GENE-030826-21Danio rerioFrom_analysisPanther
PhylomeDB
ZFIN:ZDB-GENE-091118-94Danio rerioFrom_analysisPanther
PhylomeDB
HGNC:1867Homo sapiensFrom_analysisOMA
Panther
PhylomeDB
MGI:1347085Mus musculusFrom_analysisOMA
Panther
PhylomeDB
MGI:2677454Mus musculusFrom_analysisOMA
Panther
PhylomeDB
RGD:620246Rattus norvegicusFrom_analysisPanther
PhylomeDB
RGD:620247Rattus norvegicusFrom_analysisPanther
PhylomeDB
RGD:1586489Rattus norvegicusFrom_analysisPanther
PhylomeDB
Paralog (14)
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Predicted to be involved in centriole replication and mitotic cell cycle. Predicted to be located in centriole and centrosome. Is an ortholog of human CETN2 (centrin 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR08D7.5
Corresponding_CDS_historyR08D7.5:wp94
R08D7.5:wp254
Corresponding_transcriptR08D7.5.1
Other_sequenceCR07119
Tcir_isotig19422
CR06507
Tcir_isotig22403
CBC16009_1
CRC04685_1
Associated_featureWBsf225503
WBsf225504
Experimental_infoRNAi_resultWBRNAi00051545Inferred_automaticallyRNAi_primary
WBRNAi00034749Inferred_automaticallyRNAi_primary
WBRNAi00062334Inferred_automaticallyRNAi_primary
WBRNAi00017586Inferred_automaticallyRNAi_primary
WBRNAi00114653Inferred_automaticallyRNAi_primary
WBRNAi00005229Inferred_automaticallyRNAi_primary
Expr_pattern (6)
Drives_constructWBCnstr00030895
Construct_productWBCnstr00030895
Microarray_results (20)
Expression_cluster (118)
SAGE_tagSAGE:aagaagacttStrandSense
Unambiguously_mapped
SAGE:atttcaaaaaStrandAntisense
SAGE:atctctaattataatccStrandSense
Unambiguously_mapped
SAGE:gacgttgacgaactgtgStrandSense
Unambiguously_mapped
SAGE:atctctaattStrandSense
Unambiguously_mapped
SAGE:gtgatatgagStrandAntisense
SAGE:taatccttctStrandAntisense
SAGE:atttcaaaaaactgttgStrandAntisense
SAGE:gagagaaggaStrandSense
Unambiguously_mapped
SAGE:gacgttgacgStrandSense
Unambiguously_mapped
Interaction (14)
Map_infoPositivePositive_cloneR08D7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII0.0556967
ReferenceWBPaper00055090
MethodGene