WormBase Tree Display for Gene: WBGene00010699

WBGene00010699 SMap: S_parent: Sequence: K08H10
  Identity: Version: 2
    Name: CGC_name: trpp-6 Person_evidence: WBPerson3188
      Sequence_name: K08H10.9
      Molecular_name: K08H10.9
        K08H10.9.1
        CE18881
      Other_name: CELE_K08H10.9 Accession_evidence: NDB BX284605
      Public_name: trpp-6
    DB_info: Database: AceView gene 5K473
        WormQTL gene WBGene00010699
        WormFlux gene WBGene00010699
        NDB locus_tag CELE_K08H10.9
        Panther gene CAEEL|WormBase=WBGene00010699|UniProtKB=Q9XU81
          family PTHR12817
        NCBI gene 179394
        RefSeq protein NM_073170.7
        TREEFAM TREEFAM_ID TF313010
        TrEMBL UniProtAcc Q9XU81
        UniProt_GCRP UniProtAcc Q9XU81
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 08 Aug 2013 16:41:57 WBPerson2970 Name_change: CGC_name: trpp-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: trpp
    Allele (15)
    Strain: WBStrain00055491
    RNASeq_FPKM (74)
    GO_annotation: 00101565
      00101566
      00101567
      00101568
      00101569
      00118032
      00118033
    Ortholog: WBGene00038651 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00070356 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00148197 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00190879 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00225200 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g1756 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12098 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9088 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21476 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g19884 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11826 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8724 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5090 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1025 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4018 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00064.g3112 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-trpp-6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15799 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00006.g411 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_016871 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g14426 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50262610 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15393 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00243394 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00259147 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00302904 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000005641 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0266722 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1602 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-041010-122 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:23069 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:23066 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1914341 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1925482 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1309325 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1591735 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to be located in cis-Golgi network and trans-Golgi network. Predicted to be part of TRAPP complex. Is an ortholog of human TRAPPC6B (trafficking protein particle complex subunit 6B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K08H10.9
    Corresponding_transcript: K08H10.9.1
    Other_sequence (26)
    Associated_feature: WBsf647123
      WBsf232313
  Experimental_info (7)
  Map_info: Map: V Position: 2.22871
    Positive: Positive_clone: K08H10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00060970
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene