WormBase Tree Display for Gene: WBGene00010479

WBGene00010479 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 1
    Name: Sequence_name: K01G5.8
      Molecular_name: K01G5.8a
        K01G5.8a.1
        CE16198
        K01G5.8b
        CE16199
        K01G5.8b.1
      Other_name: CELE_K01G5.8 Accession_evidence: NDB BX284603
      Public_name: K01G5.8
    DB_info: Database: AceView gene 3L830
        WormQTL gene WBGene00010479
        WormFlux gene WBGene00010479
        NDB locus_tag CELE_K01G5.8
        Panther gene CAEEL|WormBase=WBGene00010479|UniProtKB=G5EDH3
          family PTHR13282
        NCBI gene 176500
        RefSeq protein NM_001392206.1
            NM_066965.6
        TREEFAM TREEFAM_ID TF314020
        TrEMBL UniProtAcc G5ECC8
            G5EDH3
        UniProt_GCRP UniProtAcc G5EDH3
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (24)
    RNASeq_FPKM (74)
    GO_annotation: 00011520
      00011521
    Contained_in_operon: CEOP3700
    Ortholog: WBGene00037764 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00147015 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00133985 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00055812 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00090025 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00010479 Caenorhabditis elegans From_analysis: Inparanoid_8
        Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00224995 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5281 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g16368 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4893 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9474 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15333 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g10498 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2655 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3818 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1067 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g401 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00298.g8760 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-K01G5.8 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g7309 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00923.g16788 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11453 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010412 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g2124 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30112920 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8930 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00238962 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00275479 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00261152 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288679 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0031603 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-040704-44 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:24563 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:1915172 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1583796 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1561287 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Structured_description: Automated_description: Located in nucleolus. Is an ortholog of human FAM32A (family with sequence similarity 32 member A). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K01G5.8a
      K01G5.8b
    Corresponding_transcript (2)
    Other_sequence (56)
    Associated_feature: WBsf651474
      WBsf651475
      WBsf227497
  Experimental_info: RNAi_result: WBRNAi00033833 Inferred_automatically: RNAi_primary
      WBRNAi00006696 Inferred_automatically: RNAi_primary
      WBRNAi00025836 Inferred_automatically: RNAi_primary
      WBRNAi00027395 Inferred_automatically: RNAi_primary
      WBRNAi00063089 Inferred_automatically: RNAi_primary
      WBRNAi00016412 Inferred_automatically: RNAi_primary
      WBRNAi00049639 Inferred_automatically: RNAi_primary
      WBRNAi00023513 Inferred_automatically: RNAi_primary
      WBRNAi00025837 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9469
      Expr1018403
      Expr1034574
      Expr1153366
      Expr2004656
      Expr2022884
    Drives_construct: WBCnstr00031389
    Construct_product: WBCnstr00014034
      WBCnstr00031389
    Microarray_results (31)
    Expression_cluster (104)
  Map_info: Positive: Positive_clone: K01G5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III 5.07998
  Reference: WBPaper00038444
    WBPaper00038491
    WBPaper00055090
  Method: Gene