WormBase Tree Display for Gene: WBGene00010317

WBGene00010317 SMap: S_parent: Sequence: F59B8
  Identity: Version: 2
    Name: CGC_name: idh-1 Person_evidence: WBPerson261
      Sequence_name: F59B8.2
      Molecular_name: F59B8.2a
        F59B8.2a.1
        CE03436
        F59B8.2b
        CE47303
        F59B8.2c
        CE47163
        F59B8.2b.1
        F59B8.2c.1
      Other_name: CELE_F59B8.2 Accession_evidence: NDB BX284604
      Public_name: idh-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 08 Oct 2008 10:23:18 WBPerson2970 Name_change: CGC_name: idh-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: idh
    Allele (27)
    Strain: WBStrain00003527
      WBStrain00002807
      WBStrain00032810
    RNASeq_FPKM (74)
    GO_annotation (16)
    Ortholog: WBGene00040364 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00093731 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00081068 Caenorhabditis remanei From_analysis: OMA
            TreeFam
      WBGene00148359 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00119790 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00070251 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00076234 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00153807 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g11017 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1350 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g17279 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19297 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7845 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g15616 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4664 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3390 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1627 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22156 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00092.g4073 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-idh-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8186 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00590.g13243 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10025 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013429 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03193 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g14360 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40345100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11315 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00265952 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294529 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000004164 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      SGD:S000002224 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      SGD:S000004954 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0001248 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-031006-1 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:5382 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:96413 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:2862 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00007942 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description (2)
  Disease_info: Potential_model: DOID:5016 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5382)
      DOID:4928 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5382)
      DOID:3068 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5382)
      DOID:0050908 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5382)
      DOID:3910 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5382)
      DOID:3070 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5382)
      DOID:3907 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5382)
      DOID:417 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5382)
      DOID:9119 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5382)
  Molecular_info: Corresponding_CDS: F59B8.2a
      F59B8.2b
      F59B8.2c
    Corresponding_transcript: F59B8.2a.1
      F59B8.2b.1
      F59B8.2c.1
    Other_sequence (57)
    Associated_feature: WBsf668157
      WBsf668158
      WBsf981804
      WBsf997420
      WBsf1017963
      WBsf230567
      WBsf230568
      WBsf230569
  Experimental_info: RNAi_result: WBRNAi00090634 Inferred_automatically: RNAi_primary
      WBRNAi00080812 Inferred_automatically: RNAi_primary
      WBRNAi00065271 Inferred_automatically: RNAi_primary
      WBRNAi00016084 Inferred_automatically: RNAi_primary
      WBRNAi00001636 Inferred_automatically: RNAi_primary
      WBRNAi00033293 Inferred_automatically: RNAi_primary
      WBRNAi00049155 Inferred_automatically: RNAi_primary
      WBRNAi00113980 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1063
      Chronogram1718
      Expr6263
      Expr6264
      Expr1018358
      Expr1034502
      Expr1152898
      Expr2012669
      Expr2030905
    Drives_construct: WBCnstr00003334
      WBCnstr00004581
      WBCnstr00031510
    Construct_product: WBCnstr00031510
    Microarray_results (25)
    Expression_cluster (219)
    Interaction (103)
  Map_info: Map: IV Position: 4.24582 Error: 0.002337
    Positive: Positive_clone: F59B8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (11)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene