WormBase Tree Display for Gene: WBGene00009979
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WBGene00009979 | SMap | S_parent | Sequence | F53F1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | cutl-1 | Person_evidence | WBPerson52 | |||||
Sequence_name | F53F1.1 | ||||||||
Molecular_name | F53F1.1 | ||||||||
F53F1.1.1 | |||||||||
CE47606 | |||||||||
Other_name | CELE_F53F1.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | cutl-1 | ||||||||
DB_info | Database | AceView | gene | 5N884 | |||||
WormQTL | gene | WBGene00009979 | |||||||
WormFlux | gene | WBGene00009979 | |||||||
NDB | locus_tag | CELE_F53F1.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009979|UniProtKB=Q9XVM7 | |||||||
family | PTHR22907 | ||||||||
NCBI | gene | 186168 | |||||||
RefSeq | protein | NM_073920.4 | |||||||
TREEFAM | TREEFAM_ID | TF315307 | |||||||
TrEMBL | UniProtAcc | Q9XVM7 | |||||||
UniProt_GCRP | UniProtAcc | Q9XVM7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 07 May 2008 10:04:34 | WBPerson2970 | Name_change | CGC_name | cutl-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cutl | ||||||||
Allele (29) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00102626 | ||||||||
Ortholog | WBGene00028960 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00052785 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00125514 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
CBOVI.g225 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CSP21.g7327 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
CSP26.g6634 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP26.g6638 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP28.g5115 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP32.g5666 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
CSP39.g11013 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
Cni-cutl-1 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold630.g19776 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00149.g5673 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_03836 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_018565 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
chrV_pilon.g16232 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
FB:FBgn0004511 | Drosophila melanogaster | From_analysis | Hieranoid | ||||||
Inparanoid | |||||||||
SonicParanoid | |||||||||
Paralog (31) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F53F1.1 | |||||||
Corresponding_CDS_history | F53F1.1:wp188 | ||||||||
F53F1.1:wp227 | |||||||||
F53F1.1:wp231 | |||||||||
Corresponding_transcript | F53F1.1.1 | ||||||||
Other_sequence | PT01957 | ||||||||
BM01590 | |||||||||
HC08770 | |||||||||
Associated_feature | WBsf1001813 | ||||||||
WBsf1001814 | |||||||||
WBsf1001815 | |||||||||
WBsf1001816 | |||||||||
WBsf1020717 | |||||||||
WBsf1020718 | |||||||||
WBsf1020719 | |||||||||
WBsf1020720 | |||||||||
Experimental_info | RNAi_result (2) | ||||||||
Expr_pattern | Expr1022907 | ||||||||
Expr1151938 | |||||||||
Expr2010616 | |||||||||
Expr2028856 | |||||||||
Microarray_results (22) | |||||||||
Expression_cluster (50) | |||||||||
Interaction | WBInteraction000370383 | ||||||||
Map_info | Map | V | Position | 5.25536 | Error | 0.005791 | |||
Positive | Positive_clone | F53F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |