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WormBase Tree Display for Gene: WBGene00009793

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Name Class

WBGene00009793SMapS_parentSequenceCHROMOSOME_X
IdentityVersion2
NameCGC_namepkn-1Person_evidenceWBPerson56
WBPerson505
Sequence_nameF46F6.2
Molecular_name (12)
Other_nameCELE_F46F6.2Accession_evidenceNDBBX284606
Public_namepkn-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
219 Feb 2010 11:41:45WBPerson2970Name_changeCGC_namepkn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpkn
Allele (71)
StrainWBStrain00002832
WBStrain00036580
RNASeq_FPKM (74)
GO_annotation (22)
OrthologWBGene00058472Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00036928Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00147540Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00133018Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00224413Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3007Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2372Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3155Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11939Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16024Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25169Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4018Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6022Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19575Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19785Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_25181.g27278Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-pkn-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13738Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00005.g327Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01331Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023574Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04364Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7052Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0071300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19897Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238748Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257735Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286465Trichuris murisFrom_analysisWormBase-Compara
WBGene00301911Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0020621Drosophila melanogasterFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-1902Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-061207-17Danio rerioFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-061013-393Danio rerioFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-061207-42Danio rerioFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-070424-87Danio rerioFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:9405Homo sapiensFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:9406Homo sapiensFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:17999Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:109211Mus musculusFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:2388285Mus musculusFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:108022Mus musculusFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:69308Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:620146Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
Paralog (14)
Structured_descriptionAutomated_descriptionPredicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction. Located in M band and striated muscle dense body. Expressed in neurons and pharyngeal muscle cell. Is an ortholog of human PKN3 (protein kinase N3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF46F6.2a
F46F6.2b
F46F6.2c
F46F6.2d
Corresponding_CDS_historyF46F6.2:wp83
F46F6.2b:wp271
Corresponding_transcriptF46F6.2a.1
F46F6.2b.1
F46F6.2c.1
F46F6.2d.1
Other_sequence (35)
Associated_feature (14)
Experimental_infoRNAi_resultWBRNAi00047564Inferred_automaticallyRNAi_primary
WBRNAi00109716Inferred_automaticallyRNAi_primary
WBRNAi00001225Inferred_automaticallyRNAi_primary
WBRNAi00032385Inferred_automaticallyRNAi_primary
WBRNAi00015119Inferred_automaticallyRNAi_primary
WBRNAi00021734Inferred_automaticallyRNAi_primary
WBRNAi00109763Inferred_automaticallyRNAi_primary
WBRNAi00076440Inferred_automaticallyRNAi_primary
WBRNAi00109669Inferred_automaticallyRNAi_primary
WBRNAi00109810Inferred_automaticallyRNAi_primary
Expr_patternChronogram1838
Expr6091
Expr9387
Expr11211
Expr11212
Expr1015556
Expr1034280
Expr1151402
Expr2014949
Expr2033184
Drives_constructWBCnstr00003354
WBCnstr00018222
WBCnstr00031916
Construct_product (3)
Microarray_results (22)
Expression_cluster (143)
Interaction (59)
Map_infoMapXPosition2.17965Error0.004397
PositivePositive_cloneF46F6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027258
WBPaper00038084
WBPaper00038444
WBPaper00038491
WBPaper00038843
WBPaper00040494
WBPaper00055090
WBPaper00057543
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene