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WormBase Tree Display for Gene: WBGene00009291

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Name Class

WBGene00009291SMapS_parentSequenceF31D4
IdentityVersion2
NameCGC_nameclec-264Person_evidenceWBPerson2531
Sequence_nameF31D4.4
Molecular_nameF31D4.4
F31D4.4.1
CE42466
Other_nameCELE_F31D4.4Accession_evidenceNDBBX284605
Public_nameclec-264
DB_infoDatabaseAceViewgene5V318
WormQTLgeneWBGene00009291
WormFluxgeneWBGene00009291
NDBlocus_tagCELE_F31D4.4
PanthergeneCAEEL|WormBase=WBGene00009291|UniProtKB=O45419
familyPTHR22991
NCBIgene185147
RefSeqproteinNM_075626.5
TrEMBLUniProtAccO45419
UniProt_GCRPUniProtAccO45419
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
209 Oct 2007 15:40:28WBPerson2970Name_changeCGC_nameclec-264
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (62)
RNASeq_FPKM (74)
GO_annotation00034473
Contained_in_operonCEOP5499
OrthologWBGene00027121Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00142867Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00063553Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00159380Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00190703Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00145430Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00141828Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00190881Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00146186Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00132447Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00132597Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00062084Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00084353Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064424Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064425Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00084341Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00123610Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00136220Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g889Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g1347Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7264Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1202Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2242Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9945Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17501Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2611Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1903Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-clec-264Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_03433.g30168Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19866Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_021946Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07211Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_50425500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g18184Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00090946Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094396Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094398Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094407Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275712Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277927Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277931Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00259063Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (51)
Structured_descriptionAutomated_descriptionInvolved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF31D4.4
Corresponding_CDS_historyF31D4.4:wp188
Corresponding_transcriptF31D4.4.1
Associated_featureWBsf653634
WBsf669930
WBsf979013
Experimental_infoRNAi_resultWBRNAi00014142Inferred_automaticallyRNAi_primary
WBRNAi00046002Inferred_automaticallyRNAi_primary
WBRNAi00031615Inferred_automaticallyRNAi_primary
Expr_patternExpr1013609
Expr1034058
Expr1149901
Expr2010156
Expr2028399
Microarray_results (18)
Expression_cluster (148)
InteractionWBInteraction000136126
WBInteraction000269353
WBInteraction000281708
WBInteraction000315878
WBInteraction000366809
WBInteraction000379188
WBInteraction000431527
WBInteraction000446178
WBInteraction000449477
WBInteraction000547324
Map_infoMapVPosition25.4353Error0.013321
PositivePositive_cloneF31D4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene