WormBase Tree Display for Gene: WBGene00009256

WBGene00009256 SMap: S_parent: Sequence: F29F11
  Identity: Version: 2
    Name: CGC_name: tut-2 Paper_evidence: WBPaper00033042
          Person_evidence: WBPerson4802
      Sequence_name: F29F11.3
      Molecular_name: F29F11.3
        F29F11.3.1
        CE23690
      Other_name: ctu-2 Paper_evidence: WBPaper00035125
        CELE_F29F11.3 Accession_evidence: NDB BX284605
      Public_name: tut-2
    DB_info: Database (10)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 06 Apr 2009 15:16:23 WBPerson9133 Name_change: CGC_name: tut-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tut
    Allele (25)
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog: WBGene00031222 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065020 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00155733 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00120030 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00223957 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g12366 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3194 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15964 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8264 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g13384 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g12266 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9261 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13423 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g26253 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1519 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-tut-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15539 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00391.g10620 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11814 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016461 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10747 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15052 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50297910 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15578 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239932 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00116841 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00263874 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00299551 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000005063 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
      FB:FBgn0032793 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-040801-79 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:28005 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:1914215 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1562594 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Structured_description: Automated_description: Predicted to enable sulfurtransferase activity. Predicted to be involved in tRNA wobble position uridine thiolation. Predicted to be located in cytosol. Is an ortholog of human CTU2 (cytosolic thiouridylase subunit 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F29F11.3
    Corresponding_transcript: F29F11.3.1
    Other_sequence: CBC05224_1
    Associated_feature: WBsf647183
      WBsf1001158
      WBsf1020329
      WBsf232407
  Experimental_info: RNAi_result: WBRNAi00001206 Inferred_automatically: RNAi_primary
      WBRNAi00045931 Inferred_automatically: RNAi_primary
      WBRNAi00082169 Inferred_automatically: RNAi_primary
      WBRNAi00014109 Inferred_automatically: RNAi_primary
      WBRNAi00031581 Inferred_automatically: RNAi_primary
      WBRNAi00045932 Inferred_automatically: RNAi_primary
      WBRNAi00061793 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027690
      Expr1034036
      Expr1149832
      Expr2017637
      Expr2035777
    Drives_construct: WBCnstr00032338
    Construct_product: WBCnstr00032338
    Microarray_results (20)
    Expression_cluster (71)
    Interaction (71)
  Map_info: Map: V Position: 2.69553 Error: 0.004144
    Positive: Positive_clone: F29F11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00033042
    WBPaper00035125
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene