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WormBase Tree Display for Gene: WBGene00009139

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Name Class

WBGene00009139SMapS_parentSequenceF25H9
IdentityVersion1
NameSequence_nameF25H9.7
Molecular_nameF25H9.7a
F25H9.7a.1
CE23682
F25H9.7b
CE45335
F25H9.7b.1
Other_nameCELE_F25H9.7Accession_evidenceNDBBX284605
Public_nameF25H9.7
DB_infoDatabaseAceViewgene5N949
WormQTLgeneWBGene00009139
WormFluxgeneWBGene00009139
NDBlocus_tagCELE_F25H9.7
PanthergeneCAEEL|WormBase=WBGene00009139|UniProtKB=P91989
familyPTHR13137
NCBIgene179830
RefSeqproteinNM_001269580.3
NM_001269581.3
TREEFAMTREEFAM_IDTF105635
TrEMBLUniProtAccP91989
E1B6U7
UniProt_GCRPUniProtAccP91989
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (17)
RNASeq_FPKM (74)
GO_annotation00008086
00008087
00008088
00008089
00008090
00008091
00008092
00116914
00116915
OrthologWBGene00028936Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00052804Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00120479Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00103579Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00219506Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00219522Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00223859Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g1202Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9290Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4999Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g3082Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19101Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g22586Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8255Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8933Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g5158Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g7750Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00318.g9112Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-F25H9.7Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold282.g728Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01175.g19015Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_018581Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07945Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13559Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50159400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g16252Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244096Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00259093Strongyloides rattiFrom_analysisWormBase-Compara
SGD:S000002919Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0038437Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-041010-94Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:21752Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1913288Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1305143Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionAutomated_descriptionPredicted to be involved in mitochondrial respiratory chain complex II assembly and succinate metabolic process. Predicted to be located in mitochondrial intermembrane space. Is an ortholog of human SDHAF3 (succinate dehydrogenase complex assembly factor 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF25H9.7a
F25H9.7b
Corresponding_transcriptF25H9.7a.1
F25H9.7b.1
Other_sequenceASC16796_1
HC00860
AS14960
JI211770.1
PPC05549_1
Acan_isotig12827
CBC06773_1
ACC03670_1
HCC05175_1
Tcir_isotig20410
Associated_featureWBsf647461
WBsf232783
Experimental_info (7)
Map_infoPositivePositive_cloneF25H9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV5.34903
ReferenceWBPaper00038491
WBPaper00055090
MethodGene