WormBase Tree Display for Gene: WBGene00009122

WBGene00009122 SMap: S_parent: Sequence: F25H2
  Identity: Version: 2
    Name: CGC_name: tct-1 Person_evidence: WBPerson565
      Sequence_name: F25H2.11
      Molecular_name: F25H2.11
        F25H2.11.1
        CE09656
      Other_name: CELE_F25H2.11 Accession_evidence: NDB BX284601
      Public_name: tct-1
    DB_info: Database: AceView gene 1L147
        WormQTL gene WBGene00009122
        WormFlux gene WBGene00009122
        NDB locus_tag CELE_F25H2.11
        Panther gene CAEEL|WormBase=WBGene00009122|UniProtKB=Q93573
          family PTHR11991
        NCBI gene 172944
        RefSeq protein NM_001392937.1
        SwissProt UniProtAcc Q93573
        TREEFAM TREEFAM_ID TF300238
        UniProt_GCRP UniProtAcc Q93573
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 02 Jul 2004 16:55:44 WBPerson1971 Name_change: CGC_name: tct-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tct
    Allele (20)
    Strain: WBStrain00053453
    RNASeq_FPKM (74)
    GO_annotation: 00086209
      00086210
      00086211
      00086212
      00086213
    Contained_in_operon: CEOP1624
    Ortholog: WBGene00025340 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00086124 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00112025 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00119628 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00209698 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00234156 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10005 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12431 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g14101 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8360 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g9635 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3961 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17607 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g22121 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g21422 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g15150 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00495.g11520 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00495.g11524 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-tct-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold547.g3535 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00385.g10527 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_002410 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04085 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5304 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g9249 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10213700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2079 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239597 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00264994 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286348 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000001539 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0037874 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-990603-10 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:12022 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:24088 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:33737 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:104890 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:621623 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Located in endoplasmic reticulum. Is an ortholog of human TPT1 (tumor protein, translationally-controlled 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F25H2.11
    Corresponding_transcript: F25H2.11.1
    Associated_feature: WBsf218455
      WBsf218456
      WBsf218457
  Experimental_info: RNAi_result (20)
    Expr_pattern: Expr8606
      Expr8607
      Expr9546
      Expr1015594
      Expr1033973
      Expr1149449
      Expr2017364
      Expr2035501
    Drives_construct: WBCnstr00032447
    Construct_product (2)
    Antibody: WBAntibody00001910
    Microarray_results (18)
    Expression_cluster (156)
    Interaction (104)
  Map_info: Map: I Position: 5.05566 Error: 9.3e-05
    Positive: Positive_clone: F25H2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene