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WormBase Tree Display for Gene: WBGene00009051

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Name Class

WBGene00009051SMapS_parentSequenceF22D6
IdentityVersion3
NameCGC_namenduf-6
Sequence_nameF22D6.4
Molecular_nameF22D6.4
F22D6.4.1
CE05685
Other_namendus-6Person_evidenceWBPerson555
CELE_F22D6.4Accession_evidenceNDBBX284601
Public_namenduf-6
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
226 Feb 2008 13:57:13WBPerson2970Name_changeCGC_namenduf-6
316 Jan 2023 18:37:21WBPerson51134Name_changeOther_namendus-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnduf
AlleleWBVar02154164
WBVar01499786
WBVar01499054
WBVar00297993
WBVar00647630
WBVar00647631
WBVar00337546
WBVar01498959
StrainWBStrain00049344
RNASeq_FPKM (73)
GO_annotation (12)
OrthologWBGene00072278Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00039452Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00146552Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00103393Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00099655Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00128838Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00223779Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9635Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g980Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15030Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13059Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10729Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8239Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15431Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1751Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g18346Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19208Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00152.g5733Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-nduf-6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9950Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00933.g16885Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07581Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_000251Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05512Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g12569Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10082300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1305Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00236940Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00260482Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288148Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0031684Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040912-86Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:7713Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:107932Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:3156Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1584802Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_description (2)
Disease_infoPotential_modelDOID:0112073Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:7713)
DOID:4362Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:7713)
Molecular_infoCorresponding_CDSF22D6.4
Corresponding_transcriptF22D6.4.1
Other_sequence (40)
Associated_featureWBsf643423
WBsf981038
WBsf217941
WBsf217942
Experimental_infoRNAi_result (17)
Expr_patternExpr1018697
Expr1033947
Expr1149241
Expr2013934
Expr2032173
Drives_constructWBCnstr00032497
Construct_productWBCnstr00032497
Microarray_results (20)
Expression_cluster (94)
Interaction (81)
Map_infoMapIPosition1.72178Error0.00283
PositivePositive_cloneF22D6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00005928
WBPaper00028429
WBPaper00038491
WBPaper00055090
WBPaper00062388
WBPaper00064339
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene