WormBase Tree Display for Gene: WBGene00009010

WBGene00009010 SMap: S_parent: Sequence: F21D5
  Identity: Version: 1
    Name: Sequence_name: F21D5.5
      Molecular_name: F21D5.5
        F21D5.5.1
        CE27135
      Other_name: 4J500 Accession_evidence: EMBL AF292046
        CELE_F21D5.5 Accession_evidence: NDB BX284604
      Public_name: F21D5.5
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (67)
    RNASeq_FPKM (74)
    GO_annotation: 00065468
      00065469
      00065470
      00065471
      00065472
    Contained_in_operon: CEOP4304
    Ortholog: WBGene00068902 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00036372 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00163099 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00236801 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g7874 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4792 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g3248 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12504 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4006 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g15727 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11135 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8621 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3721 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16038 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00088.g3977 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-F21D5.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10462 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02417.g26399 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07757 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016042 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04532 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04534 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_40059800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_X0167600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11147 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242131 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00106864 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00263981 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287688 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000004765 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      FB:FBgn0037578 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-061013-433 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:9154 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:1891698 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1303331 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Structured_description: Automated_description: Enables double-stranded DNA binding activity. Predicted to be involved in DNA repair. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 2B2 and microcephaly, seizures, and developmental delay. Is an ortholog of human PNKP (polynucleotide kinase 3'-phosphatase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0110179 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9154)
      DOID:0080457 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9154)
      DOID:0081383 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9154)
  Molecular_info: Corresponding_CDS: F21D5.5
    Corresponding_CDS_history: F21D5.5:wp47
    Corresponding_transcript: F21D5.5.1
    Other_sequence (29)
    Associated_feature: WBsf668122
      WBsf997269
      WBsf1017875
      WBsf230457
      WBsf230458
  Experimental_info (7)
  Map_info: Positive: Positive_clone: F21D5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 3.95814
  Reference: WBPaper00006241
    WBPaper00026935
    WBPaper00038491
    WBPaper00055090
  Method: Gene