WormBase Tree Display for Gene: WBGene00008979

WBGene00008979 SMap: S_parent: Sequence: F20D1
  Identity: Version: 2
    Name: CGC_name: slc-25A18.1
      Sequence_name: F20D1.9
      Molecular_name: F20D1.9
        F20D1.9.1
        CE47961
      Other_name: CELE_F20D1.9 Accession_evidence: NDB BX284606
      Public_name: slc-25A18.1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 16 Jan 2018 11:32:43 WBPerson1983 Name_change: CGC_name: slc-25A18.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: slc
    Allele (37)
    RNASeq_FPKM (74)
    GO_annotation (11)
    Contained_in_operon: CEOPX132
    Ortholog: WBGene00029624 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00058593 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00162287 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00129635 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00109202 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00223727 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2531 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g16148 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19673 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13323 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP31.g24917 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9723 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g17256 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9010 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8795 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00218.g7244 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_29495.g27747 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-F20D1.9 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold466.g1590 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00143.g5511 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01731 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025598 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00706 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5775 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0138700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20686 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241069 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00272041 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259110 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286920 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296076 Trichuris muris From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-041111-192 Danio rerio From_analysis: Panther
            EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      FB:FBgn0260743 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0037970 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-2745 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040801-184 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-110408-61 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-110408-66 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:19954 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:10988 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1915517 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1919053 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1307826 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1590470 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (35)
    Structured_description: Automated_description: Predicted to enable L-aspartate transmembrane transporter activity and L-glutamate transmembrane transporter activity. Predicted to be involved in L-glutamate transmembrane transport; aspartate transmembrane transport; and malate-aspartate shuttle. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 3. Is an ortholog of human SLC25A18 (solute carrier family 25 member 18) and SLC25A22 (solute carrier family 25 member 22). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0080440 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:19954)
  Molecular_info: Corresponding_CDS: F20D1.9
    Corresponding_CDS_history: F20D1.9:wp234
    Corresponding_transcript: F20D1.9.1
    Other_sequence (69)
    Associated_feature: WBsf1008064
      WBsf238279
  Experimental_info: RNAi_result: WBRNAi00013618 Inferred_automatically: RNAi_primary
      WBRNAi00076320 Inferred_automatically: RNAi_primary
      WBRNAi00094935 Inferred_automatically: RNAi_primary
      WBRNAi00045100 Inferred_automatically: RNAi_primary
      WBRNAi00023428 Inferred_automatically: RNAi_primary
      WBRNAi00117467 Inferred_automatically: RNAi_primary
      WBRNAi00024003 Inferred_automatically: RNAi_primary
      WBRNAi00023715 Inferred_automatically: RNAi_primary
      WBRNAi00031169 Inferred_automatically: RNAi_primary
      WBRNAi00023203 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1183
      Expr5804
      Expr14638
      Expr1026344
      Expr1033909
      Expr1149050
      Expr2002780
      Expr2020998
    Drives_construct (3)
    Construct_product: WBCnstr00032549
      WBCnstr00041189
    Microarray_results (18)
    Expression_cluster (131)
    Interaction (51)
  Map_info: Map: X Position: 21.7444
    Positive: Positive_clone: F20D1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00059575
    WBPaper00061547
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene