WormBase Tree Display for Gene: WBGene00008922
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WBGene00008922 | SMap | S_parent | Sequence | F17C11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F17C11.11 | |||||||
Molecular_name | F17C11.11a | ||||||||
F17C11.11a.1 | |||||||||
CE26809 | |||||||||
F17C11.11b | |||||||||
CE45293 | |||||||||
F17C11.11b.1 | |||||||||
Other_name | CELE_F17C11.11 | Accession_evidence | NDB | BX284605 | |||||
Public_name | F17C11.11 | ||||||||
DB_info | Database | AceView | gene | 5L418 | |||||
WormQTL | gene | WBGene00008922 | |||||||
WormFlux | gene | WBGene00008922 | |||||||
NDB | locus_tag | CELE_F17C11.11 | |||||||
NCBI | gene | 179515 | |||||||
RefSeq | protein | NM_001392603.1 | |||||||
NM_001269350.3 | |||||||||
TREEFAM | TREEFAM_ID | TF316468 | |||||||
TrEMBL | UniProtAcc | E1B6S4 | |||||||
Q9BI97 | |||||||||
UniProt_GCRP | UniProtAcc | Q9BI97 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (18) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00031199 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00041481 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00120576 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00066242 | Caenorhabditis remanei | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00156867 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
CSP26.g10376 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP28.g901 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP28.g902 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP29.g17929 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP40.g1579 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cnig_chr_V.g19320 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold629.g11283 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00065.g3100 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_12165 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_016551 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Pan_g12996 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
Pan_g23479 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
chrV_pilon.g15644 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00291007 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
WBGene00302102 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
Paralog (45) | |||||||||
Structured_description | Automated_description | Enriched in body wall musculature; g2; intestine; neurons; and somatic gonad precursor based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and daf-12 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by twenty-one chemicals including 1-methylnicotinamide; Tunicamycin; and levamisole based on RNA-seq; microarray; and proteomic studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00044872 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1012527 | ||||||||
Expr1148836 | |||||||||
Expr2002683 | |||||||||
Expr2020899 | |||||||||
Drives_construct | WBCnstr00032592 | ||||||||
Construct_product | WBCnstr00032592 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (281) | |||||||||
Interaction | WBInteraction000562319 | ||||||||
WBInteraction000580619 | |||||||||
Map_info | Positive | Positive_clone | F17C11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 2.83271 | |||||||
Reference | WBPaper00061547 | ||||||||
WBPaper00065841 | |||||||||
Method | Gene |