WormBase Tree Display for Gene: WBGene00008636
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| WBGene00008636 | SMap | S_parent | Sequence | F10A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F10A3.11 | |||||||
| Molecular_name | F10A3.11 | ||||||||
| F10A3.11.1 | |||||||||
| CE45070 | |||||||||
| Other_name | CELE_F10A3.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F10A3.11 | ||||||||
| DB_info | Database | AceView | gene | 5Q645 | |||||
| WormQTL | gene | WBGene00008636 | |||||||
| WormFlux | gene | WBGene00008636 | |||||||
| NDB | locus_tag | CELE_F10A3.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008636|UniProtKB=O45342 | |||||||
| family | PTHR47629 | ||||||||
| NCBI | gene | 184280 | |||||||
| RefSeq | protein | NM_074671.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322162 | |||||||
| TrEMBL | UniProtAcc | O45342 | |||||||
| UniProt_GCRP | UniProtAcc | O45342 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (35) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00061229 | Caenorhabditis remanei | From_analysis | OMA | |||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WBGene00061230 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00148529 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00152945 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00141132 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WBGene00161926 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00081330 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WBGene00119824 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| WBGene00125169 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| WBGene00152863 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| CSP28.g7567 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP31.g15653 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| CSP31.g7837 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| CSP32.g1469 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| CSP32.g1470 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| CSP38.g4977 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| CSP39.g21241 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g17059 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (118) | |||||||||
| Structured_description | Automated_description | Enriched in germ line; muscle cell; and neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and csr-1 based on microarray and RNA-seq studies. Is affected by four chemicals including methylmercuric chloride; resveratrol; and Chlorpyrifos based on microarray studies. Is predicted to encode a protein with the following domains: PAN-like domain and PAN-3 domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F10A3.11 | |||||||
| Corresponding_CDS_history | F10A3.11:wp215 | ||||||||
| Corresponding_transcript | F10A3.11.1 | ||||||||
| Associated_feature | WBsf661039 | ||||||||
| WBsf662143 | |||||||||
| WBsf233081 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00023407 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013023 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023986 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023186 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023698 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044196 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1043 | ||||||||
| Chronogram1044 | |||||||||
| Chronogram1635 | |||||||||
| Expr1010554 | |||||||||
| Expr1148152 | |||||||||
| Expr2002367 | |||||||||
| Expr2020585 | |||||||||
| Drives_construct | WBCnstr00032811 | ||||||||
| Construct_product | WBCnstr00032811 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (40) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Positive | Positive_clone | F10A3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 9.81077 | |||||||
| Reference | WBPaper00026225 | ||||||||
| Method | Gene |
